LOCUS BC008388 1310 bp mRNA linear HTC 23-JUN-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 114, mRNA (cDNA clone
IMAGE:3935614), with apparent retained intron.
ACCESSION BC008388
VERSION BC008388.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1310)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1310)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10880974
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1310
/db_xref="H-InvDB:HIT000087057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3935614"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 488 a 248 c 293 g 281 t
ORIGIN
1 agaggcccgg atggaggacg cagaggcacg ctgttgccat ggcagtgtgg tcctggctgc
61 cgcggaggca ggtgccgggg tctcctttgc ctcgatgtga agagcttaga aagaggagga
121 gaggagaact cccccggcca tctctgtgat cccagccgcc gcattttaca cagcatattt
181 ccttcacaaa cagaaaatga atgaaaataa agatactgat tcaaagaaaa gtgaagaata
241 cgaagatgac tttgaaaagg acctggagtg gttaattaat gaaaatgaaa aaagtgatgc
301 cagcataata gagatggctt gtgagaagga agagaatatt aaccaagact taaaagagaa
361 tgagacagta atggagcaca ccaaacggca ttctgatcct gacaaatctt tgcaggatga
421 ggtctcacca agaagaaatg acatcatttc tgtaccaggt attcaacctt tggatcccat
481 atcagattca gatagtgaaa actctttcca ggaatccaaa ctagaaagcc agaaagactt
541 ggaggaggaa gaggatgagg aagtaaggag atatattatg gagaaaattg tacaagctaa
601 caagcttcta cagaatcaag aaccggtgaa tgataaaagg gagcgaaaac ttaagttcaa
661 ggaccagtta gttgatttgg aagttcctcc actagaagac actactactt ctaaaaatta
721 ttttgaaaac gaaaggaata tgtttgggaa actgtcacaa ttatgtattt ccaatgattt
781 tggacaagaa gatgtgctcc tgtcacttac taatggaagc tgtgaagaaa acaaggatag
841 gacaatactg gtagagagag atggaaaatt tgaacttctg aatttacaag acattgccag
901 tcaggggatt ttgcctccca ttaataatgc aaatagtaca gaaaatgacc ctcagcagtt
961 gttacccaga tcttccaact cctctgtcag tggcaccaag aaagaagatt ctacagcaaa
1021 gattcatgct gtcactcact catcaacagg agagccgctg gcttatatcg ctcagccacc
1081 actcaaccgc aagacttgtc caagctctgc tgtcaactca gatcgaagta aagggaatgg
1141 gaaatctaat cacaggacac agtctgcaca tatctcacca gtgacttcaa catactgtct
1201 ttcccctcga cagaaagaac tacaaaaaca actagaagaa aagagagaaa aactgaaaag
1261 agaggaagag cgacgaaaaa taaaaaaaaa aagaaaaaaa aaaaaaaaaa
//