LOCUS BC008368 2649 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 12 open reading frame 11, mRNA (cDNA clone
MGC:946 IMAGE:3355282), complete cds.
ACCESSION BC008368
VERSION BC008368.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11024685.
FEATURES Location/Qualifiers
source 1..2649
/db_xref="H-InvDB:HIT000033745"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:946 IMAGE:3355282"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2649
/gene="C12orf11"
/gene_synonym="FLJ10630"
/gene_synonym="FLJ10637"
/db_xref="GeneID:55726"
/db_xref="HGNC:HGNC:20174"
CDS 185..2305
/gene="C12orf11"
/gene_synonym="FLJ10630"
/gene_synonym="FLJ10637"
/codon_start=1
/product="chromosome 12 open reading frame 11"
/protein_id="AAH08368.1"
/db_xref="GeneID:55726"
/db_xref="HGNC:HGNC:20174"
/translation="MKIFSESHKTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPL
APISKSLWTCSVESSMEYCRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELM
AALAAVGPPNPRADPECCSILHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRI
ICITNAKSDSHVRMLEDCVQETIHEHNKLAANSDHLMQIQKCELVLIHTYPVGEDSLV
SDRSKKELSPVLTSEVHSVRAGRHLATKLNILVQQHFDLASTTITNIPMKEEQHANTS
ANYDVELLHHKDAHVDFLKSGDSHLGGGSREGSFKETITLKWCTPRTNNIELHYCTGA
YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSS
RSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKD
QLEKHTRYWPMIISQTTIFNMQAVVPLASVIVKESLTEEDVLNCQKTIYNLVDMERKN
DPLPISTVGTRGKGPKRDEQYRIMWNELETLVRAHINNSEKHQRVLECLMACRSKPPE
EEERKKRGRKREDKEDKSEKAVKDYEQEKSWQDSERLKGILERGKEELAEAEIIKDSP
DSPEPPNKKPLVEMDETPQVEKSKGPVSLLSLWSNRINTANSRKHQEFAGRLNSVNNR
AELYQHLKEENGMETTENGKASRQ"
BASE COUNT 897 a 479 c 556 g 717 t
ORIGIN
1 agcctgggaa ggaccggtgt gctaggagat gatcggggaa agcatagtcc cctgtctgtg
61 gcaccagaca ctcccgactg tgcgctgact ctccccgccc agccagcagc cttttccaga
121 gaggctgtgg tccatagcct ctgttcgttt tcactgcagg accaggcacg aaagttaaaa
181 caaaatgaag attttttctg aatctcataa aacagtgttt gttgtggatc actgccctta
241 tatggcagaa tcttgcaggc agcatgtcga gtttgatatg ctggtgaaga atagaaccca
301 aggaatcatt cctttggccc ccatatctaa atcattgtgg acttgctcag tagaatcttc
361 catggaatat tgtagaataa tgtatgatat atttcctttc aaaaagctgg tgaattttat
421 tgtgagtgac tctggagcac atgttttaaa ttcttggact caagaagacc aaaatttaca
481 ggagctaatg gcagcattag ccgctgttgg gcctcctaat cctcgggcag atccagagtg
541 ctgcagtatt ctgcatggcc ttgttgcagc agtggaaact ctctgcaaaa ttactgaata
601 ccaacatgag gctcgtactc tactcatgga gaatgcagaa cgtgttggaa atagaggacg
661 aataatctgt attactaatg caaaaagtga tagtcatgtg cgaatgcttg aagactgtgt
721 ccaggaaacg attcatgaac ataacaagct tgctgcaaat tcagatcatc tcatgcagat
781 tcaaaaatgt gagttggtct tgatccacac ctacccagtt ggtgaagaca gccttgtatc
841 tgatcgttct aaaaaagagt tgtccccggt tttaaccagt gaagttcata gtgttcgtgc
901 aggacggcat cttgctacca aattgaatat tttagtacag caacattttg acttggcttc
961 aactactatt acaaatattc caatgaagga agaacagcat gctaacacat ctgccaatta
1021 tgatgtggag ctacttcatc acaaagatgc acatgtagat ttcctgaaaa gtggtgattc
1081 gcatctaggt ggcggcagtc gagaaggctc gtttaaagaa acaataacat taaagtggtg
1141 tacaccaagg acaaataaca ttgaattaca ctattgtact ggagcttatc ggatttcacc
1201 tgtagatgta aatagtagac cttcctcctg ccttactaat tttcttctaa atggtcgttc
1261 tgttttattg gaacaaccac gaaagtcagg ttctaaagtc attagtcata tgcttagtag
1321 ccatggagga gagatttttt tgcacgtcct tagcagttct cgatccattc tagaagatcc
1381 accttcaatt agtgaaggat gtggaggaag agttacagac taccggatta cagattttgg
1441 tgaatttatg agggaaaaca gattaactcc ttttctagac cccagatata aaatcgatgg
1501 aagtcttgag gtccctttgg aacgagcaaa agatcagtta gaaaaacata cccgttactg
1561 gcctatgatc atttcacaaa ccaccatttt taacatgcaa gcggtagttc cattagccag
1621 tgttattgtg aaagaatctc tgacagaaga agatgtgtta aactgtcaaa aaacaatata
1681 caacttagtt gatatggaaa gaaaaaatga tcctctacct atttccacag ttggtacaag
1741 aggaaagggc cctaaaagag atgaacaata ccgtatcatg tggaatgaat tagaaaccct
1801 tgtcagagcc catatcaaca actcagagaa acatcaaaga gtcttggaat gtctgatggc
1861 atgcaggagc aaacccccag aagaggaaga acgaaagaaa cgaggaagaa agagggaaga
1921 caaagaggac aagtcagaga aagcagtgaa agattatgaa caggaaaagt cttggcaaga
1981 ctcagagaga ttaaaaggaa tcttagagcg tggaaaagaa gaattggctg aagctgagat
2041 tataaaagat tcgcctgatt ccccagaacc tccaaacaaa aaaccccttg ttgaaatgga
2101 tgaaactcca caagtggaaa aatcaaaagg gccagtgtcg ttattatcct tgtggagtaa
2161 tagaatcaat actgccaatt ccagaaaaca tcaggaattt gctggacgtt tgaactctgt
2221 taataacaga gctgaactat atcaacatct taaagaggaa aatgggatgg agacaacaga
2281 aaatggaaaa gccagccggc agtgaagagt gacttgaaga actaaattta gcatattgca
2341 aaaatatttt gtgcggaatt cgatataagt acttttacag caagatggta tagttatgtt
2401 gcctggactg gtttttacat ttttaaaata tttcagctgt catttttgta ctaattataa
2461 aattggcaca taattcaaaa atatacattt gagatgattt gtcctcccaa attatacaag
2521 tttattttat ggtataaagt gttctctctg gaaatgtttt taaaaaaatt cttaggcttc
2581 tctttgcgaa ataaaactat taaaatattt gaaatgcata aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaa
//