LOCUS BC008282 2434 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens SH3-domain binding protein 1, mRNA (cDNA clone
MGC:10501 IMAGE:3639782), complete cds.
ACCESSION BC008282
VERSION BC008282.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2434)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15147251.
FEATURES Location/Qualifiers
source 1..2434
/db_xref="H-InvDB:HIT000033695"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10501 IMAGE:3639782"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2434
/gene="SH3BP1"
/db_xref="GeneID:23616"
/db_xref="HGNC:HGNC:10824"
CDS 145..2010
/gene="SH3BP1"
/codon_start=1
/product="SH3BP1 protein"
/protein_id="AAH08282.1"
/db_xref="GeneID:23616"
/db_xref="HGNC:HGNC:10824"
/translation="MAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLERDVL
QPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHSHT
TMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR
SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVM
MLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELP
EPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQE
VNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGD
INFNVSGLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAAT
KERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPP
APPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPAS
PGPASPSPVSLSNPAQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASETN"
BASE COUNT 542 a 831 c 668 g 393 t
ORIGIN
1 ctgcaggtag aacagcggct ggagccggcc aagcgggcag cccacaacat ccacaagcgg
61 ctgcaggcct gtctgcaggg ccagagcggg gcagacatgg acaagcgggt gaagaagctt
121 cccctcatgg ctctgtccac cacgatggct gagagcttca aggagctgga ccctgattcc
181 agcatgggga aggccttgga gatgagctgt gccatccaga atcagctggc ccgcatcctg
241 gccgagtttg agatgaccct ggagagggac gtcctgcagc cactcagcag gctgagtgag
301 gaggagctgc cagccatcct caaacacaag aaaagcctcc agaagctcgt gtccgactgg
361 aacacactca agagcaggct cagtcaggca accaagaatt caggcagcag tcaaggccta
421 ggaggcagcc cgggtagtca cagccatacg accatggcca acaaggtgga gacgctgaag
481 gaggaggagg aggagctgaa gaggaaagtg gagcaatgca gggacgagta cttggctgac
541 ctgtaccact ttgttaccaa ggaggactcc tatgccaact acttcattcg tctcctggag
601 attcaggccg attaccatcg caggtcactg agctcgctgg acacagccct ggctgagctg
661 agggagaacc acggccaagc agaccactcc ccttcgatga cagccaccca cttccccagg
721 gtgtatgggg tgtcgctggc aacccacctg caagagctgg gccgggagat tgccctgccc
781 atcgaggcct gcgtcatgat gctgctttct gagggcatga aggaagaggg tctcttccgt
841 ctggctgctg gggcctcggt gctgaagcgt ctcaagcaga caatggcctc ggacccccac
901 agcctggagg agttctgctc cgacccgcac gctgtggcag gtgccctcaa gtcctatctg
961 cgggagctgc cagagcctct gatgaccttc gacctctatg atgactggat gagggcagcc
1021 agcctgaagg agccaggggc ccggctgcag gccctccaag aggtgtgcag ccgcctaccc
1081 cccgagaacc tcagcaacct caggtacctg atgaagttcc tggcacggct ggccgaggag
1141 caggaggtga acaagatgac acccagcaac atcgccatag tcctgggacc caacttgctg
1201 tggccacctg agaaagaagg ggaccaggcc cagctggatg cagcctccgt gtcttccatc
1261 caggtggtgg gcgtcgtcga ggcgctgatc cagagcgcag acaccctctt ccctggagac
1321 atcaacttca acgtgtcagg cctcttctca gctgttaccc tccaggacac agtcagtgac
1381 aggctggcct ctgaggaact tccgtccact gccgtgccca ccccagccac caccccggct
1441 ccggctccgg ctccagctcc agctccggcc ccagccttgg cttcagcagc taccaaggaa
1501 aggacagagt ctgaggtgcc tcccagacca gcctccccca aggtcaccag gagtcccccg
1561 gagacagctg ccccagtgga ggacatggct cggaggacca agcgcccggc gccagcccgg
1621 cccaccatgc cgccccccca ggtctccggc tcccgctcct cccctccagc cccgcccttg
1681 ccccctggct ctggcagccc tgggaccccc caagccctgc cccgacgtct ggttggcagc
1741 agcctccgag cccccacagt gccacccccg ttacccccca caccccctca gcctgcccgg
1801 cgccaaagcc ggcgttcacc agcctccccc agcccggcct ccccaggtcc agcctccccc
1861 agcccagtct ctttgagtaa ccctgcacag gtggacctgg gggctgccac agcagaggga
1921 ggagcccctg aggctatcag tggggtcccc actcccccag ctatcccccc tcagccccgc
1981 cccaggagcc ttgcctcaga gaccaactga gtggctggtt tctccctaag cagccctcag
2041 caccccctcc ctccccacct ggccctccca ggacagctct cgccccccac aaaggggcat
2101 gggcctccag cctttgccca caagtgcctc agtgcccact gggtcggccc ccatggccag
2161 gagggctcag gacaatcctc tatttcctga ccttttcctc gtccaccctg ggcttgggga
2221 cccccccacc ggactctcca ctctccggca ggtcctaggg gagccaccgg aaggaaggag
2281 aggtttgcct gctcctacgg gactgattct tctcttgccg acatgttttt tgtaaggctg
2341 gtaaataaat tattttggac aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaact cggg
//