LOCUS BC008250 940 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ethylmalonic encephalopathy 1, mRNA (cDNA clone
MGC:9282 IMAGE:3872059), complete cds.
ACCESSION BC008250
VERSION BC008250.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 940)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41327740.
FEATURES Location/Qualifiers
source 1..940
/db_xref="H-InvDB:HIT000033688"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9282 IMAGE:3872059"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..940
/gene="ETHE1"
/gene_synonym="HSCO"
/gene_synonym="YF13H12"
/db_xref="GeneID:23474"
/db_xref="HGNC:HGNC:23287"
/db_xref="MIM:608451"
CDS 30..794
/gene="ETHE1"
/gene_synonym="HSCO"
/gene_synonym="YF13H12"
/codon_start=1
/product="ethylmalonic encephalopathy 1"
/protein_id="AAH08250.1"
/db_xref="GeneID:23474"
/db_xref="HGNC:HGNC:23287"
/db_xref="MIM:608451"
/translation="MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRE
SREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVI
SRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRG
CGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLS
CEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA"
BASE COUNT 193 a 291 c 256 g 200 t
ORIGIN
1 cgctcattcc tgaccccgca gtgggcgcga tggcggaggc tgtactgagg gtcgcccggc
61 ggcagctgag ccagcgcggc gggtctggag cccccatcct cctgcggcag atgttcgagc
121 ctgtgagctg caccttcacg tacctgctgg gtgacagaga gtcccgggag gccgttctga
181 tcgacccagt cctggaaaca gcgcctcggg atgcccagct gatcaaggag ctggggctgc
241 ggctgctcta tgctgtgaat acccactgcc acgcggacca cattacaggc tcggggctgc
301 tccgttccct cctccctggc tgccagtctg tcatctcccg ccttagtggg gcccaggctg
361 acttacacat tgaggatgga gactccatcc gcttcgggcg cttcgcgttg gagaccaggg
421 ccagccctgg ccacacccca ggctgtgtca ccttcgtcct gaatgaccac agcatggcct
481 tcactggaga tgccctgttg atccgtgggt gtgggcggac agacttccag caaggctgtg
541 ccaagacctt gtaccactcg gtccatgaaa agatcttcac acttccagga gactgtctga
601 tctaccctgc tcacgattac catgggttca cagtgtccac cgtggaggag gagaggactc
661 tgaaccctcg gctcaccctc agctgtgagg agtttgtcaa aatcatgggc aacctgaact
721 tgcctaaacc tcagcagata gactttgctg ttccagccaa catgcgctgt ggggtgcaga
781 cacccactgc ctgatctcac ttctgtcaga tgctcccatc cactattaat gcactaggtg
841 ggaggagagg gcggcaatga cactgcacct ctcctttccc accgcattcc ctggagctcc
901 ctaaataaaa ctttttttaa cgtgaaaaaa aaaaaaaaaa
//