LOCUS BC008244 1557 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 2,
mRNA (cDNA clone MGC:9389 IMAGE:3872164), complete cds.
ACCESSION BC008244
VERSION BC008244.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1557)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1557)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18104978.
FEATURES Location/Qualifiers
source 1..1557
/db_xref="H-InvDB:HIT000033686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9389 IMAGE:3872164"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1557
/gene="PTPN2"
/gene_synonym="TC-PTP"
/gene_synonym="TCELLPTP"
/gene_synonym="TCPTP"
/db_xref="GeneID:5771"
/db_xref="HGNC:HGNC:9650"
/db_xref="MIM:176887"
CDS 38..1201
/gene="PTPN2"
/gene_synonym="TC-PTP"
/gene_synonym="TCELLPTP"
/gene_synonym="TCPTP"
/codon_start=1
/product="protein tyrosine phosphatase, non-receptor type
2"
/protein_id="AAH08244.1"
/db_xref="GeneID:5771"
/db_xref="HGNC:HGNC:9650"
/db_xref="MIM:176887"
/translation="MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRN
RNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVW
QQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQ
LENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSA
GIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGA
KCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLS
SKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRPRLTDT"
BASE COUNT 529 a 299 c 338 g 391 t
ORIGIN
1 gcgcaggctc tgctcgcgcc agctcgctcc cgcagccatg cccaccacca tcgagcggga
61 gttcgaagag ttggatactc agcgtcgctg gcagccgctg tacttggaaa ttcgaaatga
121 gtcccatgac tatcctcata gagtggccaa gtttccagaa aacagaaatc gaaacagata
181 cagagatgta agcccatatg atcacagtcg tgttaaactg caaaatgctg agaatgatta
241 tattaatgcc agtttagttg acatagaaga ggcacaaagg agttacatct taacacaggg
301 tccacttcct aacacatgct gccatttctg gcttatggtt tggcagcaga agaccaaagc
361 agttgtcatg ctgaaccgca ttgtggagaa agaatcggtt aaatgtgcac agtactggcc
421 aacagatgac caagagatgc tgtttaaaga aacaggattc agtgtgaagc tcttgtcaga
481 agatgtgaag tcgtattata cagtacatct actacaatta gaaaatatca atagtggtga
541 aaccagaaca atatctcact ttcattatac tacctggcca gattttggag tccctgaatc
601 accagcttca tttctcaatt tcttgtttaa agtgagagaa tctggctcct tgaaccctga
661 ccatgggcct gcggtgatcc actgtagtgc aggcattggg cgctctggca ccttctctct
721 ggtagacact tgtcttgttt tgatggaaaa aggagatgat attaacataa aacaagtgtt
781 actgaacatg agaaaatacc gaatgggtct tattcagacc ccagatcaac tgagattctc
841 atacatggct ataatagaag gagcaaaatg tataaaggga gattctagta tacagaaacg
901 atggaaagaa ctttctaagg aagacttatc tcctgccttt gatcattcac caaacaaaat
961 aatgactgaa aaatacaatg ggaacagaat aggtctagaa gaagaaaaac tgacaggtga
1021 ccgatgtaca ggactttcct ctaaaatgca agatacaatg gaggagaaca gtgagagtgc
1081 tctacggaaa cgtattcgag aggacagaaa ggccaccaca gctcagaagg tgcagcagat
1141 gaaacagagg ctaaatgaga atgaacgaaa aagaaaaagg ccaagattga cagacaccta
1201 atattcatga cttgagaata ttctgcagct ataaattttg aaccattgat gtgcaaagca
1261 agacctgaag cccactccgg aaactaaagt gaggctcgct aaccctctag attgcctcac
1321 agttgtttgt ttacaaagta aactttacat ccaggggatg aagagcaccc accagcagaa
1381 gactttgcag aacctttaat tggatgtgtt aagtgttttt aatgagtgta tgaaatgtag
1441 aaagatgtac aagaaataaa ttaggagaga ttactttgta ttgtactgcc attcctactg
1501 tatttttata ctttttggca gcattaaata tttttgttaa ataaaaaaaa aaaaaaa
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