LOCUS BC008213 1945 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens zinc finger protein 589, mRNA (cDNA clone
IMAGE:3448300), partial cds.
ACCESSION BC008213
VERSION BC008213.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1945)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1945)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1945
/db_xref="H-InvDB:HIT000087016"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3448300"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1945
/gene="ZNF589"
/gene_synonym="SZF1"
/db_xref="GeneID:51385"
CDS <1..725
/gene="ZNF589"
/gene_synonym="SZF1"
/codon_start=3
/product="ZNF589 protein"
/protein_id="AAH08213.1"
/db_xref="GeneID:51385"
/translation="IVLNGHWRTHTGEKPYTCFECGRNFSLKSALSVHQRIHSGEKPY
ACTECGQGFITKSQLIRHQRTHTGEKPYVCGECGRGFIAQSTLHYHRSTHSKEKPYVC
SQCGRGFCDKSTLLAHEQTHSGEKPYVCGECGRGFGRKILLNRHWRTHTGEKPYACIE
CGRNFSHKSTLSLHQRIHSGEKPYACVECGQSFRRKSQLIIHQKIHSGKSFRGARSED
VILATSQPSATPAEMLREKPCL"
BASE COUNT 506 a 478 c 478 g 483 t
ORIGIN
1 ggatagtcct caatggacac tggaggacac acacgggaga gaagccttac acgtgctttg
61 agtgtgggcg aaactttagc ctcaagtccg ctcttagtgt acatcagagg atacactctg
121 gggagaagcc ttatgcatgc acggagtgtg ggcaaggctt tatcacgaaa tcacagctca
181 tcagacacca gaggacacac acaggagaaa agccttatgt ctgcggagag tgtgggcgag
241 gctttatagc tcagtcaacc ctccactacc accggagtac acactccaag gaaaaacctt
301 atgtgtgcag ccagtgtggg cgaggctttt gtgataaatc aactctcctc gcacacgagc
361 agacacattc aggggagaag ccttatgtgt gtggggaatg tgggcgggga tttggccgga
421 agatactcct caacagacac tggaggacac acacaggaga gaaaccttac gcatgcatcg
481 agtgtgggcg aaactttagc cacaagtcca ctctcagctt acatcagagg atacactcgg
541 gggagaagcc ttatgcatgc gtggagtgtg ggcaaagctt taggagaaag tcacagctca
601 tcatacacca gaagatacac tcggggaaaa gctttagagg tgcaaggagt gaggatgtga
661 ttttagcaac aagtcagcca tcagccacac cagcggaaat gcttagggag aagccttgtt
721 tgtaaggtaa tgtggacaga gctgtacgtg gacatcatta cttgtcacgt gtcagaggac
781 acactcggga gaaaccttca tggagtgaga gtaaggtgtt ggctggaagt ggccccttaa
841 gagatacttg gagtcaaatc tatccactgt acgcccaccc cactcttgtt ctaagagctt
901 tggggacagt cttttgaccc cttacattcc tttagatgtg aagatgacag agatctaact
961 tctgagagca gaggtgtcaa gtgacggtcc ccttggagga atggtctttg catctgacta
1021 cttccttctg caactgtgtt cttccattag cttccatgac actctcctgc tttatttttt
1081 tctacatctc tagcctttgc tgtttcctct cctaccccac ctttagattt tactcagagt
1141 tcagtctcca gccctacaat ctgagggaca cctttaccag gtccccttcc taaccctcca
1201 gtcccaaatc caagattctt taaccacact ctaaaagttc ttcagactca ggacttaaac
1261 atagccacgc caccttggcc ttcaatgaca gggatctagc aatgctgcat catcagcctt
1321 ccaataccag gtttaagggt attttaaaca cagctcctct taaatcctcc aatctcagta
1381 cccagtgttt tagccatgct cgggtggcta aattacatcc aggaatggtg ccagggcctt
1441 tagccatttg tctctcctca cactccaggg cccatatggc ccaggttctg acagtttgcc
1501 ttactccctt gggctggggc tagccctacc tgataccctg tgtcaatgag tgtaccttgg
1561 agagctatcc actcaggccc cagtgcctct atttgctaag ggactctgcc acagaaaaga
1621 aggggagaga tgttcatgta acctcaaaat acttaggctt ggttttgatg ctagagagga
1681 aaaaggactt ggagagagag aaggaatggc tggtccagag gcttttgtcc actccctctc
1741 actggaagtg gttgatctcc agggaatccc caaggttagc ctgcttaggg gaagggctag
1801 gggtacctgg aatgtaggat ctcccccatg cctggcctac caccctaatg tgtctggaat
1861 tggtgggttc ttggtcttgc tgacttcaag aatgaagccg tggaccctca cggtgagtgt
1921 tacaattctt aaaaaaaaaa aaaaa
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