LOCUS BC008210 1432 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens nonhomologous end-joining factor 1, mRNA (cDNA clone
IMAGE:3855314), partial cds.
ACCESSION BC008210
VERSION BC008210.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC008210.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: c Column: 21.
FEATURES Location/Qualifiers
source 1..1432
/db_xref="H-InvDB:HIT000087015"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3855314"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1432
/gene="NHEJ1"
/gene_synonym="FLJ12610"
/gene_synonym="XLF"
/db_xref="GeneID:79840"
/db_xref="HGNC:HGNC:25737"
CDS <1..423
/gene="NHEJ1"
/gene_synonym="FLJ12610"
/gene_synonym="XLF"
/codon_start=1
/product="NHEJ1 protein"
/protein_id="AAH08210.2"
/db_xref="GeneID:79840"
/db_xref="HGNC:HGNC:25737"
/translation="DRLKTEPFEENSFLEQFMIEKLPEACSIGDGKPFVMNLQDLYMA
VTTQEVQVGQKHQGAGDPHTSNSASLQGIDSQCVNQPEQLVSSAPTLSAPEKESTALC
RDLSCQRSRGRSQGVSSVNLLWPQLLRMDLENSFQASP"
BASE COUNT 393 a 350 c 303 g 386 t
ORIGIN
1 gatcgattga agacagaacc atttgaagaa aattccttct tggaacaatt tatgatagag
61 aaactgccag aggcatgcag cattggtgat ggaaagccct ttgtcatgaa tctgcaggat
121 ctgtatatgg cagtcaccac acaagaggtc caagtgggac agaagcatca aggcgctgga
181 gatcctcata cctcaaacag tgcttccctg caaggaatcg atagccaatg tgtaaaccag
241 ccagaacaac tggtctcctc agccccaacc ctctcagcac ctgagaaaga gtccacggcc
301 ctctgcagag acctcagctg tcaaaggtca agaggaagaa gccaaggggt ctcttcagtt
361 aatctgttgt ggcctcagct gctgaggatg gacttggaga acagcttcca agcttcacct
421 tgaaagaagc ttacatggca gcaatatttc taaaatagtg atacagtcag aggcctcctg
481 taagggcgag agaactgaag ttgatgttga caggcccaca gggaattggc cttccctgtt
541 caagtggaag ccagtctctg agaatcccgt gctctcctct cttttggtgg aggttctgta
601 ggttcaggtt tctaccatgg actttaggta tatagggcaa gtcagcaaga aagcaccaca
661 cactcaggaa gccttgtcta cctttcccta gcgtctctag ccagccagcc ccagatactc
721 ctcagagacc cacttctctc ttttgcatgg aataaaaagc actcacagtc cctgcttttg
781 ggattactta tgctgtggaa ctcataaccc aattcacttc cttcactggg tcccacccca
841 ttgttgtctc tggatgaagt ctagccatca gtctggtcct tcagattctt cgtaaacttt
901 tctgcagttg ccagagctaa gtctccattt ggaaactttg atctcaagaa ctctcttgat
961 ggtgggcaca agacagatag atgattgctg ctttcctttg ccaaacttgg atgcattttt
1021 ctctttgttt ccaaagtata ggcaacaggt taaactacca cgtggggtag tttatcaatc
1081 ctcccgcctc atccttctgc ataactggga ctaaaggcac acaccaccac acctagctaa
1141 tttttgtatt tttttgtgtg tggagacaag gctttgccat gttgcccagg ctggtcttga
1201 actcctggac tctagtgatc tgcccacctc aacctcccaa agtgctggga ttacaggcat
1261 gagctaccac gcctatccaa tttctggttt atttactttc gatggttaaa tgcctcctta
1321 ttcaaatatc ctgtatatat actggcgttt ctgtcctgat gtcaagtctc gagagaagat
1381 gatcaaacaa taataaaata attataataa gaacaacaaa aaaaaaaaaa aa
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