LOCUS BC008197 1742 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor, interleukin 3 regulated, mRNA (cDNA
clone MGC:5038 IMAGE:3048714), complete cds.
ACCESSION BC008197
VERSION BC008197.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1742)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1742)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630428.
FEATURES Location/Qualifiers
source 1..1742
/db_xref="H-InvDB:HIT000033669"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5038 IMAGE:3048714"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1742
/gene="NFIL3"
/gene_synonym="E4BP4"
/gene_synonym="NF-IL3A"
/gene_synonym="NFIL3A"
/db_xref="GeneID:4783"
/db_xref="HGNC:HGNC:7787"
/db_xref="MIM:605327"
CDS 34..1422
/gene="NFIL3"
/gene_synonym="E4BP4"
/gene_synonym="NF-IL3A"
/gene_synonym="NFIL3A"
/codon_start=1
/product="nuclear factor, interleukin 3 regulated"
/protein_id="AAH08197.1"
/db_xref="GeneID:4783"
/db_xref="HGNC:HGNC:7787"
/db_xref="MIM:605327"
/translation="MQLRKMQTVKKEQASLDASSNVDKMMVLNSALTEVSEDSTTGEE
LLLSEGSVGKNKSSACRRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLE
NKLIALGEENATLKAELLSLKLKFGLISSTAYAQEIQKLSNSTAVYFQDYQTSKSNVS
SFVDEHEPSMVSSSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQII
KQEPMELESYTREPRDDRGSYTASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSE
TDDGVVGKSSDGEDEQQVPKGPIHSPVELKHVHATVVKVPEVNSSALPHKLRIKAKAM
QIKVEAFDNEFEATQKLSSPIDMTSKRHFELEKHSAPSMVHSSLTPFSVQVTNIQDWS
LKSEHWHQKELSGKTQNSFKTGVVEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRL
IATQPISASDSG"
BASE COUNT 555 a 351 c 386 g 450 t
ORIGIN
1 cctacacaca tagatagggt aaggttgttt ctgatgcagc tgagaaaaat gcagaccgtc
61 aaaaaggagc aggcgtctct tgatgccagt agcaatgtgg acaagatgat ggtccttaat
121 tctgctttaa cggaagtgtc agaagactcc acaacaggtg aggagctgct tctcagtgaa
181 ggaagtgtgg ggaagaacaa atcttctgca tgtcggagga aacgggaatt cattcctgat
241 gaaaagaaag atgctatgta ttgggaaaaa aggcggaaaa ataatgaagc tgccaaaaga
301 tctcgtgaga agcgtcgact gaatgacctg gttttagaga acaaactaat tgcactggga
361 gaagaaaacg ccactttaaa agctgagctg ctttcactaa aattaaagtt tggtttaatt
421 agctccacag catatgctca agagattcag aaactcagta attctacagc tgtgtacttt
481 caagattacc agacttccaa atccaatgtg agttcatttg tggacgagca cgaaccctcg
541 atggtgtcaa gtagttgtat ttctgtcatt aaacactctc cacaaagctc gctgtccgat
601 gtttcagaag tgtcctcagt agaacacacg caggagagct ctgtgcaggg aagctgcaga
661 agtcctgaaa acaagttcca gattatcaag caagagccga tggaattaga gagctacaca
721 agggagccaa gagatgaccg aggctcttac acagcgtcca tctatcaaaa ctatatgggg
781 aattctttct ctgggtactc acactctccc ccactactgc aagtcaaccg atcctccagc
841 aactccccga gaacgtcgga aactgatgat ggtgtggtag gaaagtcatc tgatggagaa
901 gacgagcaac aggtccccaa gggccccatc cattctccag ttgaactcaa gcatgtgcat
961 gcaactgtgg ttaaagttcc agaagtgaat tcctctgcct tgccacacaa gctccggatc
1021 aaagccaaag ccatgcagat caaagtagaa gcctttgata atgaatttga ggccacgcaa
1081 aaactttcct cacctattga catgacatct aaaagacatt tcgaactcga aaagcatagt
1141 gccccaagta tggtacattc ttctcttact cctttctcag tgcaagtgac taacattcaa
1201 gattggtctc tcaaatcgga gcactggcat caaaaagaac tgagtggcaa aactcagaat
1261 agtttcaaaa ctggagttgt tgaaatgaaa gacagtggct acaaagtttc tgacccagag
1321 aacttgtatt tgaagcaggg gatagcaaac ttatctgcag aggttgtctc actcaagaga
1381 cttatagcca cacaaccaat ctctgcttca gactctgggt aaattactac tgagtaagag
1441 ctgggcattt agaaagatgt catttgcaat agagcagtcc attttgtatt atgctgaatt
1501 ttcactggac ctgtgatgtc atttcactgt gatgtgcaca tgttgtctgt ttggtgtctt
1561 tttgtgcaca gattatgatg aagattagat tgtgttatca ctctgcctgt gtatagtcag
1621 atagtccatg cgaaggctgt atatattgaa cattattttt gttgttctat tataaagtgt
1681 gtaagttacc agtttcaata aaggattggt gacaaacaca gaaaaaaaaa aaaaaaaaaa
1741 aa
//