LOCUS BC008124 1221 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens neurofascin homolog (chicken), mRNA (cDNA clone
IMAGE:4149230), partial cds.
ACCESSION BC008124
VERSION BC008124.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1221)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1221)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC008124.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: i Column: 6.
FEATURES Location/Qualifiers
source 1..1221
/db_xref="H-InvDB:HIT000087008"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4149230"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1221
/gene="NFASC"
/gene_synonym="FLJ46866"
/gene_synonym="KIAA0756"
/gene_synonym="NF"
/gene_synonym="NRCAML"
/db_xref="GeneID:23114"
/db_xref="HGNC:HGNC:29866"
/db_xref="IMGT/GENE-DB:29866"
/db_xref="MIM:609145"
CDS <1..886
/gene="NFASC"
/gene_synonym="FLJ46866"
/gene_synonym="KIAA0756"
/gene_synonym="NF"
/gene_synonym="NRCAML"
/codon_start=2
/product="NFASC protein"
/protein_id="AAH08124.2"
/db_xref="GeneID:23114"
/db_xref="HGNC:HGNC:29866"
/db_xref="IMGT/GENE-DB:29866"
/db_xref="MIM:609145"
/translation="RHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ
WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD
VPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGS
LEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLEC
RVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQD
LAKAYLTVLGNCPCSPWH"
BASE COUNT 304 a 346 c 335 g 236 t
ORIGIN
1 ccggcacacg atctcggtga gagtaaaggc tgctccctac tggctggacg aacccaagaa
61 ccttattctg gctcctggcg aggatgggag actggtgtgt cgagccaatg gaaaccccaa
121 acccactgtc cagtggatgg tgaatgggga acctttgcaa tcggcaccac ctaacccaaa
181 ccgtgaggtg gccggagaca ccatcatctt ccgggacacc cagatcagca gcagggctgt
241 gtaccagtgc aacacctcca acgagcatgg ctacctgctg gccaacgcct ttgtcagtgt
301 gctggatgtg ccgcctcgga tgctgtcgcc ccggaaccag ctcattcgag tgattcttta
361 caaccggacg cggctggact gccctttctt tgggtctccc atccccacac tgcgatggtt
421 taagaatggg caaggaagca acctggatgg tggcaactac catgtttatg agaacggcag
481 tctggaaatt aagatgatcc gcaaagagga ccagggcatc tacacctgtg tcgccaccaa
541 catcctgggc aaagctgaaa accaagtccg cctggaggtc aaagacccca ccaggatcta
601 ccggatgccc gaggaccagg tggccagaag gggcaccacg gtgcagctgg agtgtcgggt
661 gaagcacgac ccctccctga aactcaccgt ctcctggctg aaggatgacg agccgctcta
721 tattggaaac aggatgaaga aggaagacga ctccctgacc atctttgggg tggcagagcg
781 ggaccagggc agttacacgt gtgtcgccag caccgagcta gaccaagacc tggccaaggc
841 ctacctcacc gtgctaggta actgcccgtg ctcaccctgg cactgaccag ccccaccccc
901 tccccagcag ccagagaagc agtggcccgg ggcagttccg agggcagtgc ctgcagtcaa
961 gtggccgggt caggcgtggt gatctcttct tgcctcgtga tgtcagggtt agggagctgc
1021 cagtttcaga acaagctgtg ctggacaggt tacctcctga gtggagtcat taacttcccc
1081 acgtctcaac tgaaaggggc ctgagtgata tagagaaagt ggagaggggt ttctcgttgt
1141 gatcatttta cctttcttac agctaactcc accactaagt caattaaaac aatccatcct
1201 taaaaaaaaa aaaaaaaaaa a
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