LOCUS BC008094 877 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone IMAGE:4179231), complete cds. ACCESSION BC008094 VERSION BC008094.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 877) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 877) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361328 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..877 /db_xref="H-InvDB:HIT000033646" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4179231" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..877 /gene="RGR" /db_xref="GeneID:5995" /db_xref="MIM:600342" CDS 6..368 /gene="RGR" /codon_start=1 /product="RGR protein" /protein_id="AAH08094.1" /db_xref="GeneID:5995" /db_xref="MIM:600342" /translation="MAETSALPTGFGELEVLAVGMVLLVEDPGAADSLPPTGAELGSC GQWDQPECPRCSHIQPSPCLPQALALRLGRLPGSRLPGLCDSVGQHLQQCSHRMGALS PLLHPPKCCHRSHHFEWR" BASE COUNT 211 a 258 c 220 g 188 t ORIGIN 1 tgaggatggc agagaccagt gccttgccca ccggcttcgg ggagctcgag gtgctggctg 61 tggggatggt gctactggtg gaagaccccg gagctgcgga ctccctgcca cctactggtg 121 ctgagcttgg ctcttgcgga cagtgggatc agcctgaatg ccctcgttgc agccacatcc 181 agccttctcc gtgtctccca caggcgctgg ccctacggct cggacggctg ccaggctcac 241 ggcttccagg gctttgtgac agcgttggcc agcatctgca gcagtgcagc catcgcatgg 301 gggcgttatc accactactg cacccgccaa aatgctgcca tcggtctcat cattttgagt 361 ggcgataggt tagccctctt gtccacttgg cctcagagca cttctcccac tccttacatc 421 ccagcccctg cccctaatgc tcccttggac catcttatac acacacacac acacacacac 481 acacacacac acacacacac acaccacctt ctcagatagc aacaggcttc tctgcctcaa 541 tatagaacag ttaatccctg tgccagaggc cttagatcaa agccctttct atactgagag 601 catggcagag cagtgtgaag gcaggcaaag gggaatgagg aggtctgaat tcatctactc 661 catccctggg tggttgtagg catgtcacct tggccatctg tttctaaagc tgaaagtctg 721 aggcagcaca atggtccagg tagatattaa ttattgtgcc cacagagaat tgtttgaacc 781 tggaaggcag aggttgcagt gagctgagat ggcaccactg cactccagcc tgggcaacag 841 aatgagactc cgcctcaata aaaaaaaaaa aaaaaaa //