LOCUS BC007994 2104 bp mRNA linear HTC 26-APR-2004
DEFINITION Homo sapiens aryl hydrocarbon receptor interacting protein-like 1,
mRNA (cDNA clone IMAGE:3356509), with apparent retained intron.
ACCESSION BC007994
VERSION BC007994.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2104)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21626460
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2104
/db_xref="H-InvDB:HIT000258922"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3356509"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 528 a 555 c 621 g 400 t
ORIGIN
1 gcagccatgg atgccgctct gctcctgaac gtggaagggg tcaagaaaac cattctgcac
61 gggggcacgg gcgagctccc aaacttcatc accggatccc gagtgatctt tcatttccgc
121 accatgaaat gtgatgagga gcggacagtc attgacgaca gtcggcaggt gggccagccc
181 atgcacatca tcatcggaaa catgttcaag ctcgaggtct gggagatcct gcttacctcc
241 atgcgggtgc acgaggtggc cgagttctgg tgcgacacca tccacacggg ggtctacccc
301 atcctatccc ggagcctgag gcagatggcc cagggcaagg accccacaga gtggcacgtg
361 cacacgtgcg ggctggccaa catgttcgcc taccacacgc tgggctacga ggacctggac
421 gagctgcaga aggagcctca gcctctggtc tttgtgatcg agctgctgca ggttgatgcc
481 ccgagtgatt accagaggga gacctggaac ctgagcaatc atgagaagat gaaggcggtg
541 cccgtcctcc acggagaggg aaatcggctc ttcaagctgg gccgctacga ggaggcctct
601 tccaagtacc aggaggccat catctgccta aggaacctgc agaccaagga gaagccatgg
661 gaggtgcagt ggctgaagct ggagaagatg atcaatactc tgatcctcaa ctactgccag
721 tgcctgctga agaaggagga gtactatgag gtgctggagc acaccagtga tattctccgg
781 caccacccag gtgcgcgggg ctgcaggggc ggacagtgag ggggcgccca gcccagggcc
841 acggagacac ctgccatagc cttcctggac ttttctttcc accccaccag ggcaccaaac
901 cttgtctcca cccagccggg tttccccgag tgtgtaactg aattgtgggt gatggatggg
961 cagtgcttgg cgcggggcgg ccctttattt taatgtgtgt ttgaacactt acccaggaag
1021 ctcgccaagc ttgtgatttc agcggaacgg taaacaggcg tttaaaaaag aggggcaatc
1081 aatataggga aaaatattat gatgtcggta ctagtactgg tgttgcgagg atatggcacc
1141 gtcagtacta gtattgactt aatgctcgaa tcgtgctcac agtaaaaaca tccagcccct
1201 ggctcatgca tcaggcacac gtcgtctgcg tttattatct catttaatcc tcataatcct
1261 cataatcacc atatgaggga ggtgcaggga aagggcctga aggttatcta atttaggtag
1321 cgtctataag aaaaataaaa caaagttatg aatataaaat tactcacagg gccttaaaaa
1381 ggagaggagg aggtactgct attatgatca tcatctccat cttacagttg aggaaaccga
1441 gggatggggg atacagagag gttaaggatc atggcggggc tgagggtctt ggaggctggt
1501 gagtcccagc tgggctgggg ctgcctctga ggctgggaag ggagctgtag ctggatgctc
1561 cctgctcccc acaggcatcg tgaaggccta ctacgtgcgt gcccgggctc acgcagaggt
1621 gtggaatgag gccgaggcca aggcggacct ccagaaagtg ctggagctgg agccgtccat
1681 gcagaaggcg gtgcgcaggg agctgaggct gctggagaac cgcatggcgg agaagcagga
1741 ggaggagcgg ctgcgctgcc ggaacatgct gagccagggt gccacgcagc ctcccgcaga
1801 gccacccaca gagccacccg cacagtcatc cacagagcca cctgcagagc cacccacagc
1861 accatctgca gagctgtccg cagggccccc tgcagagcca gccacagagc cacccccgtc
1921 cccagggcac tcgctgcagc actgagcccc ctgaggccca cagccaccca ggcagggagc
1981 aagtggcctg gtcacttctg gttcgattga ccaggatcgt ggtgtcactt tttaaaattt
2041 aaaattaatt tttgaaatca aagtcagaca cacccatggt aaaaaaaaaa aaaaaaaaaa
2101 aaaa
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