LOCUS BC007962 1480 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 4,
mRNA (cDNA clone IMAGE:4301372), partial cds.
ACCESSION BC007962
VERSION BC007962.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1480)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1480)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC007962.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1480
/db_xref="H-InvDB:HIT000050492"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4301372"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1480
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
CDS <1..1150
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/codon_start=2
/product="UBR4 protein"
/protein_id="AAH07962.3"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
/translation="KALGTLGMTTNEKGQVVTKTALLKQMEELIEEPGLTCCICREGY
KFQPTKVLGIYTFTKRVALEEMENKPRKQQGYSTVSHFNIVHYDCHLAAVRLARGREE
WESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDI
KLLFLRFAMEQSFSADTGGGGRESNIHLIPYIIHTVLYVLNTTRATSREEKNLQGFLE
QPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRVEILRRLLVTSQARAVAPGGAT
RLTDKAVKDYSAYRSSLLFWALVDLIYNMFKKVPTSNTEGGWSCSLAEYIRHNDMPIY
EAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDPESFLKDLLNSVP"
BASE COUNT 350 a 424 c 386 g 320 t
ORIGIN
1 gaaggccctg ggcaccctgg gcatgacgac aaatgaaaag ggccaggtcg tgaccaagac
61 agcactcctg aagcagatgg aagagctgat cgaggagcct ggcctcacgt gctgcatctg
121 cagggaggga tacaagttcc agcccacaaa ggtcctgggc atttatacct tcacgaagcg
181 ggtagccttg gaggagatgg agaataagcc ccggaaacag cagggctaca gcaccgtgtc
241 ccacttcaac attgtgcact acgactgcca tctggctgcc gtcaggttgg ctcgaggccg
301 ggaagagtgg gagagtgccg ccctgcagaa tgccaacacc aagtgcaacg ggctccttcc
361 ggtctgggga cctcatgtcc ctgaatcagc ttttgccact tgcttggcaa gacacaacac
421 ttacctccag gaatgtacag gccagcggga gcccacgtat cagctcaaca tccatgacat
481 caaactgctc ttcctgcgct tcgccatgga gcagtcgttc agcgcagaca ctggcggggg
541 cggccgggag agcaacatcc acctgatccc gtacatcatt cacactgtgc tttacgtcct
601 gaacacaacc cgagcaactt cccgagaaga gaagaacctc caaggctttc tggaacagcc
661 caaggagaag tgggtggaga gtgcctttga agtggacggg ccctactatt tcacagtctt
721 ggcccttcac atcctgcccc ctgagcagtg gagagccaca cgtgtggaaa tcttgcggag
781 gctgttggtg acctcgcagg ctcgggcagt ggctccaggt ggagccacca ggctgacaga
841 taaggcagtg aaggactatt ccgcttaccg ttcttccctt ctcttttggg ccctcgtcga
901 tctcatttac aacatgttta agaaggtgcc taccagtaac acagagggag gctggtcctg
961 ctctctcgct gagtacatcc gccacaacga catgcccatc tacgaagctg ccgacaaagc
1021 cctgaaaacc ttccaggagg agttcatgcc agtggagacc ttctcagagt tcctcgatgt
1081 ggccggtctt ttatcagaaa tcaccgatcc agagagcttc ctgaaggacc tgttgaactc
1141 agtcccctga ccaccacaca gcagctgcgg cggcgaagac gaagctggct tgccttccac
1201 cctctgttct ccctccttgt gcattaagtt ccctccgcgg gatgctgcat tgttaccccg
1261 ccctcccctc tctcattttt cttggtgtgg cttggggttt ttaggcttcc tgttttatct
1321 cgtgtgtgtg gtgcaccagc tatgaggttg tctgtaaccc aagccatcaa agggcctgta
1381 catacctagg agccatgagt tgtcccggcc agcttcatac ttgagtgtgc acatcttgag
1441 aaataaacaa gtgacttaac acaaaaaaaa aaaaaaaaaa
//