LOCUS BC007874 2493 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens far upstream element (FUSE) binding protein 3, mRNA
(cDNA clone IMAGE:3957939), complete cds.
ACCESSION BC007874
VERSION BC007874.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2493)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2493)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC007874.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2493
/db_xref="H-InvDB:HIT000033507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3957939"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2493
/gene="FUBP3"
/db_xref="GeneID:8939"
/db_xref="HGNC:HGNC:4005"
/db_xref="MIM:603536"
CDS 359..1144
/gene="FUBP3"
/codon_start=1
/product="FUBP3 protein"
/protein_id="AAH07874.1"
/db_xref="GeneID:8939"
/db_xref="HGNC:HGNC:4005"
/db_xref="MIM:603536"
/translation="MPPIGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQ
AESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNS
TIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK
VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKK
IQNDAGVRIQFKPDDGISPEYYRQQVAFYGQTLGQAQAHSQEQ"
BASE COUNT 737 a 429 c 571 g 756 t
ORIGIN
1 gagcggcggc gtcggcggcg tcggcggcgg cggcgacggc ggcgggggcg gtaatggcgg
61 agctggtgca ggggcagagc gctcctgtgg ggatgaaggc cgagggcttc gtggatgccc
121 tgcaccgggt ccggcagatt gctgctaaaa ttgattcaat tcctcacttg aataattcca
181 cacctctagt ggacccctca gtatatggat acggagtaca aaaacggccc ttggatgatg
241 gagcgatggg atcacactct gctcaggcta gagtgcagtg gcgccgttga actcctgggc
301 tcgagtgatc ctcccacctc ggcttcccaa gtagctggga ctacaggcat gagccaccat
361 gcctcctata ggtaaccagt taggggcctt ggtacatcaa aggacggtaa taacggaaga
421 attcaaagtg cctgacaaaa tggttggatt tattatcggc aggggaggtg agcagatttc
481 acggattcaa gcagaatctg gttgcaaaat tcagattgct tcagagagtt ctgggattcc
541 agagaggccc tgtgtactta ccggaacccc agaaagtatt gaacaagcca aacggctcct
601 gggacagatt gtggaccgct gtcgaaatgg acctggcttt cataatgaca tagacagcaa
661 cagcacaatc caggagattc tcattcccgc atctaaagtg ggtctggtca tcggcagagg
721 aggggaaaca atcaagcagt tgcaggagcg gacaggggtg aagatggtca tgatccagga
781 tggcccattg cccacgggag cagacaagcc tcttcgtatc actggagatg catttaaagt
841 acagcaagca agagaaatgg tactagagat tatccgagaa aaagaccaag ctgactttcg
901 gggtgtacgc ggcgatttca actctcgaat gggaggaggc agtatagagg tatctgtgcc
961 taggtttgct gtggggattg taataggaag aaacggggaa atgatcaaaa agatccagaa
1021 tgatgctggt gtgaggattc agtttaaacc agatgatggg attagtccag aatattacag
1081 acagcaggtc gctttctacg gacagacgtt agggcaggcg caggcccaca gccaggagca
1141 gtaggacagc gtcctcgtgg ccaactctcc cctcaaaatc attgtcaaag aaaacctatt
1201 tgtaacagag gtttttacat ttgcaaacct tttgatgaag aactgttgtt ttgttctgtg
1261 aaacactata tttagattaa cggaattttt ctaaaaatca ggaaaattag ttactaaaaa
1321 ttgctgatca tttttgtttc attatttttg ttatttcaaa tgtataagct ctgggattct
1381 ttttggagca atacctacaa agtcaggcac cagaatgtgc ctcagagctg tgacatttca
1441 acatgatggt tttggtttgg tttggttttg tgtccttttt atttgcagtt ttttctgttg
1501 caacagaaag tggcttggaa gtcttaggtg gtatgtaaca aattcttttt aaaaatttta
1561 aagcagtatt taagtattct taaatgtgta aattcattta atgttttact tctaatttct
1621 tgtatcttgg ctgtctggtt ttattgcatt tttaaaaaaa ctgaactatt atgtattgta
1681 atgaatgatg tgaattctga actgagacag ataattgtat tgctgtccaa caggggttgg
1741 gaggggcatt ttgtagggtt tgtataattt ctagagttcg aaaggggtaa tataaaaatg
1801 tgctcgtgtg tttagcctac gtttttctca tgcctccatt accagttgca attgtgtatc
1861 taagacctcc aagcttgttt ttaaaacaaa acaaaaaacc tttctctatt atctcagaaa
1921 tataaatact gttattttta atattaagaa attcaatata acttttaaca cacactgtgg
1981 aacattaaac cgtataaaaa tgtagttata actattttta attccaaggt gttgtttgct
2041 tttttctttt aaatattttc ttaatatttt gtcagattaa ctagatgaat aaataaatct
2101 agtattaacc gcattatgaa ttaaataatt ttgatttaat gaaagggata atatgatttc
2161 cagtgtttac tgtagtgtat cttgtacaga taacatgtat ttttaaaaaa aaaaacggaa
2221 ttgaagctat tttttcttgc atttctaatt gacctgaggg acattccgtt tgaaatgtac
2281 tgaagttaca gtttctggtt ttttctcctt atttttctta taatgcttga aatgtctaac
2341 tattaaaaaa gacaattgga aaatgttatg catggggttt ttaagaaaac aaagtgttct
2401 ttttatttga ctgacaattc attttacact ctatataata aaatctccac aaggcatctt
2461 gtgggcaaag tcaaaaaaaa aaaaaaaaaa aaa
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