LOCUS BC007873 1269 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:14445 IMAGE:4303959), complete cds. ACCESSION BC007873 VERSION BC007873.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1269) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1269) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007873.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: o Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1269 /db_xref="H-InvDB:HIT000033506" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14445 IMAGE:4303959" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1269 /gene="PDAP1" /gene_synonym="HASPP28" /gene_synonym="PAP" /gene_synonym="PAP1" /db_xref="GeneID:11333" /db_xref="HGNC:HGNC:14634" /db_xref="MIM:607075" CDS 11..556 /gene="PDAP1" /gene_synonym="HASPP28" /gene_synonym="PAP" /gene_synonym="PAP1" /codon_start=1 /product="PDGFA associated protein 1" /protein_id="AAH07873.1" /db_xref="GeneID:11333" /db_xref="HGNC:HGNC:14634" /db_xref="MIM:607075" /translation="MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGG DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLD GPKELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEE RKAKDDATLSGKRMQSLSLNK" BASE COUNT 345 a 302 c 386 g 236 t ORIGIN 1 cggagccgca atgcctaaag gaggaagaaa gggaggccac aaaggccggg cgaggcagta 61 tacaagccct gaggagatcg acgcgcagct gcaggctgag aagcagaagg ccagggaaga 121 agaggagcaa aaagaaggtg gagatggggc tgcaggtgac cccaaaaagg agaagaaatc 181 tctagactca gatgagagtg aggatgaaga agatgactac cagcaaaagc gcaaaggcgt 241 tgaagggctc atcgacatcg agaaccccaa ccgggtggca cagacaacca aaaaggtcac 301 acaactggat ctggacgggc caaaggagct ttcgaggaga gaacgagaag agattgagaa 361 gcagaaggca aaagagcgtt acatgaaaat gcacttggcc gggaagacag agcaagccaa 421 ggctgacctg gcccggctgg ccatcatccg gaaacagcgg gaggaggctg cccggaagaa 481 ggaagaggaa aggaaagcaa aagacgatgc cacattgtca ggaaaacgaa tgcagtcact 541 ctccctgaat aagtaactgc gacccgtggg aggagatgcc ggggacctgg gccgcgctgc 601 caggacctct gctgtgtctc gcccaccctg tgccctggcg ccgctgcaac agcccctcat 661 ggccaggagc cccccatggc ctggggcctc ctcttcatct tggcacagaa attgtttggg 721 ggatgggggg ggggactggg ggaggggtag ctgctatctt tgagacagaa agatgcagga 781 cagcatttca tatgtaacca tttgaatgtt tttgctgttt ttagaattca gagcccttgc 841 tggggggtgc ctgggagatg gggtaagaag agctttcatt tgtctggtag atagatagca 901 tgtaaggggg tggttgtccc aggaggcagc tgctgacagg tttgctacac acagccccgg 961 actgtgttgc ctgggtgctc attcagagag gggctatcat ctgggagcct gtgcccctgg 1021 gtcctcgagg gtcatggctt gtccctggtc agtcctgtct gactgacctc agggcctcac 1081 ctctctgccc ttccctgccc ggttcctact cacctggcta gggccagtgc ccattttcag 1141 ccctacccat tgatcatttc aagaaacctc tgtttactgt gtggcaccca ggcaaaacat 1201 gctccacaaa ttcaacttgt atatttggca gattaaactt gacattatcg taaaaaaaaa 1261 aaaaaaaaa //