LOCUS BC007814 1534 bp mRNA linear HUM 04-JUN-2004 DEFINITION Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone IMAGE:4299697), partial cds. ACCESSION BC007814 VERSION BC007814.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1534) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1534) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007814.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1534 /db_xref="H-InvDB:HIT000033464" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4299697" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1534 /gene="HLA-C" /gene_synonym="D6S204" /gene_synonym="HLA-JY3" /db_xref="GeneID:3107" /db_xref="MIM:142840" CDS <1..1099 /gene="HLA-C" /gene_synonym="D6S204" /gene_synonym="HLA-JY3" /codon_start=2 /product="HLA-C protein" /protein_id="AAH07814.2" /db_xref="GeneID:3107" /db_xref="MIM:142840" /translation="RVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLR NLRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAAD TAAQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLS DHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQ EQRYTCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRR KSSGGKGGSCSQAACSNSAQGSDESLITCKA" BASE COUNT 332 a 452 c 460 g 290 t ORIGIN 1 gcgggtcatg gcgccccgag ccctcctcct gctgctctcg ggaggcctgg ccctgaccga 61 gacctgggcc tgctcccact ccatgaggta tttcgacacc gccgtgtccc ggcccggccg 121 cggagagccc cgcttcatct cagtgggcta cgtggacgac acgcagttcg tgcggttcga 181 cagcgacgcc gcgagtccga gaggggagcc gcgggcgccg tgggtggagc aggaggggcc 241 ggagtattgg gaccgggaga cacagaagta caagcgccag gcacaggctg accgagtgag 301 cctgcggaac ctgcgcggct actacaacca gagcgaggac gggtctcaca ccctccagag 361 gatgtctggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggtatg accagtccgc 421 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgccgcgga 481 caccgcggct cagatcaccc agcgcaagtt ggaggcggcc cgtgcggcgg agcagctgag 541 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 601 gacgctgcag cgcgcagaac ccccaaagac acacgtgacc caccaccccc tctctgacca 661 tgaggccacc ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg 721 gcagcgggat ggggaggacc agacccagga caccgagctt gtggagacca ggccagcagg 781 agatggaacc ttccagaagt gggcagctgt ggtggtgcct tctggacaag agcagagata 841 cacgtgccat atgcagcacg aggggctgca agagcccctc accctgagct gggagccatc 901 ttcccagccc accatcccca tcatgggcat cgttgctggc ctggctgtcc tggttgtcct 961 agctgtcctt ggagctgtgg tcaccgctat gatgtgtagg aggaagagct caggtggaaa 1021 aggagggagc tgctctcagg ctgcgtgcag caacagtgcc cagggctctg atgagtctct 1081 catcacttgt aaagcctgag acagctgcct gtgtgggact gagatgcagg atttcttcac 1141 acctctcctt tgtgacttca agagcctctg gcatctcttt ctgcaaaggc acctgaatgt 1201 gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc ccgtgtccac 1261 cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc ctgttccaga 1321 gaggtggggc tggatgtctc catctctgtc tcaaattcat ggtgcactga gctgcaactt 1381 cttacttccc taatgaagtt aagaacctga atataaattt gtgttctcaa atatttgcta 1441 tgaagcgttg atggattaat taaataagtc aattcctaga agttgagaga gcaaataaag 1501 acctgagaac cttccaaaaa aaaaaaaaaa aaaa //