LOCUS BC007773 1301 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens adaptor-related protein complex 3, sigma 2 subunit,
mRNA (cDNA clone IMAGE:4139509), partial cds.
ACCESSION BC007773
VERSION BC007773.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1301)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1301)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007773.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: l Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923766.
FEATURES Location/Qualifiers
source 1..1301
/db_xref="H-InvDB:HIT000086912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4139509"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1301
/gene="AP3S2"
/gene_synonym="AP3S3"
/gene_synonym="FLJ35955"
/gene_synonym="sigma3b"
/db_xref="GeneID:10239"
/db_xref="MIM:602416"
CDS <1..602
/gene="AP3S2"
/gene_synonym="AP3S3"
/gene_synonym="FLJ35955"
/gene_synonym="sigma3b"
/codon_start=3
/product="AP3S2 protein"
/protein_id="AAH07773.1"
/db_xref="GeneID:10239"
/db_xref="MIM:602416"
/translation="ERTVAGKDDSGDSGFQQPWEATASPLLPAFQEIQQQIVRETFHL
VLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVET
LDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGL
SAAPARAVSAVKNINLPEIPRNINIGDLNIKVPNLSQFV"
misc_feature 99..464
/gene="AP3S2"
/gene_synonym="AP3S3"
/gene_synonym="FLJ35955"
/gene_synonym="sigma3b"
/note="Clat_adaptor_s; Region: Clathrin adaptor complex
small chain"
/db_xref="CDD:pfam01217"
BASE COUNT 342 a 293 c 329 g 337 t
ORIGIN
1 ctgagagaac cgtggctggc aaagatgatt caggcgattc tggttttcaa caaccatggg
61 aagccacggc tagtccgctt ctaccagcgt ttcaagaaat tcaacagcag attgttcgag
121 agactttcca tctagtcctc aagcgggatg acaacatctg taacttcttg gagggtggaa
181 gtttgattgg tggctctgac tacaaactga tctaccggca ctatgctacc ctctactttg
241 tattttgtgt ggattcctca gagagtgaac ttggaatctt ggacctcatc caggtttttg
301 tggaaactct ggataagtgt ttcgaaaatg tgtgtgaatt ggatttgatc ttccatatgg
361 ataaggtgca ctacatcctc caggaggtgg tgatgggtgg gatggtgttg gaaacaaaca
421 tgaatgaaat cgtggctcag attgaggctc aaaacaggct ggagaaatcc gagggtggcc
481 tttcagcagc ccctgcgcgg gctgtgtctg ctgtgaaaaa catcaacctg ccagagattc
541 ctcggaacat caacattggc gatctcaaca tcaaagttcc caacctgtcc cagtttgtct
601 gaggatcaag tattggcctg aaatagagtc cttaagacaa gcaaagacaa gcaaggcaag
661 cacgtctgga aacagaaccc attttgagcc ttagaagagt caagcctcag gacctggaaa
721 ctttgtgtct ggggaagact gtttggcatg gaatagggaa gggattccta ttgacactgc
781 tcgggtgcac ccagttctca catgtgcagt catgccgttc tctgatgcat acggccactg
841 cagatgtgag gggccctgcc ttcctcagta gggagtcaac atgcccaagt catttgcacc
901 tttacctctc acatggatgc tcccaagggt tagggactgc attgagcagg cccacctgct
961 tcccagaacc tcctcactag ggctgagcac cttctctgag tagagtcttc atccttagca
1021 ccacagactt ctgaggtcct gtgcccttta cttgctggtg aggtgtcata ggtagaaaag
1081 ggctggccct tcagatctgg gggtgtggtg agtggcaagt aagggcagaa ttttaggaga
1141 accagagtca cccgctggct ctactgagat tgttacaccc agaatccttt tgtgtttttt
1201 tgtggttttt ttttttccga gattgtgcca ttgcactcca gcctgggcaa caagagcaaa
1261 actctgtctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//