LOCUS BC007747 3703 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone
IMAGE:4098694), partial cds.
ACCESSION BC007747
VERSION BC007747.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3703)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007747.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: b Column: 20.
FEATURES Location/Qualifiers
source 1..3703
/db_xref="H-InvDB:HIT000086905"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4098694"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3703
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/db_xref="GeneID:26057"
CDS <1..2493
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/codon_start=1
/product="ANKRD17 protein"
/protein_id="AAH07747.2"
/db_xref="GeneID:26057"
/translation="AAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRA
ESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESLLCLACSAGYYEL
AQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTGNTALTY
ACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSN
EFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDS
GAQVNMPADSFESPLTLAACGGHVELAALLIERGASLEEVNDEGYTPLMEAAREGHEE
MVALLLGQGANINAQTEETQETALTLACCGGFLEVADFLIKAGADIELGCSTPLMEAA
QEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGG
RTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVELLLAHGA
DPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVTQLTPPSHDLNRAPR
VPVQALPMVVPPQEPDKPPANVATTLPIRNKAASKQKSSSHLPANSQDVQGYITNQSP
ESIVEEAQGKLTELEQRIKEAIEKNAQLQSLELAHADQLTKEKIEELNKTREEQIQKK
QKILEELQKVERELQLKTQQQLKKQYLEVKAQRIQLQQQQQQSCQHLGLLTPVGVGEQ
LSEGDYARLQQVDPVLLKDEPQQTAAQMGFAPIQPLAMPQALPLAAGPLPPGSIANLT
ELQVLSSLLQPCFLSTLPLILMHRLRVIMTRR"
misc_feature 646..1020
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/note="ANK; Region: ankyrin repeats"
/db_xref="CDD:cd00204"
BASE COUNT 1110 a 751 c 934 g 908 t
ORIGIN
1 gctgcaggaa taggaaaatt gtccacggct gatggtaaag cctttgcaga tcctgaagta
61 cttcggaggt tgacatcgtc tgttagttgt gcgttggatg aagctgctgc tgcacttacc
121 cgtatgagag ctgaaagcac agcaaatgca gggcagtcgg acaaccgcag tttggcagaa
181 gcctgttcag aaggagatgt aaatgctgtg cgaaagttac tcattgaagg gcgaagtgta
241 aatgaacaca cagaggaagg ggagagcctc ctttgtttag cttgttctgc tggatactat
301 gagcttgcac aggttttgtt ggcaatgcat gcaaatgtgg aagatagggg aatcaaaggt
361 gacattacac ctttaatggc tgctgctaat ggaggacatg tcaaaattgt gaagttgctg
421 ctagctcata aagcagatgt taatgcacag tcttcaacag gcaatacagc acttacatat
481 gcttgtgctg gaggctatgt agatgttgta aaggtgctct tggaatccgg tgctagtatt
541 gaggaccata atgaaaatgg tcatacccct cttatggaag ctggaagtgc tggacatgtg
601 gaagtagcca gattgctgct agaaaatggg gctggcatta atacgcattc taatgaattt
661 aaagagagtg cccttacctt agcttgttac aaaggacact tagagatggt gcgatttctt
721 ttggaagcag gcgcggatca agagcataaa acagatgaaa tgcacactgc tctgatggag
781 gcttgcatgg atggccatgt tgaagtagct aggttacttc ttgacagcgg tgcccaagtg
841 aacatgcctg ctgattcatt tgagtcacca ttaactttgg ctgcatgtgg tgggcatgtg
901 gaacttgcgg ctttacttat tgaaagagga gctagcctgg aagaggtcaa tgatgaaggt
961 tatacaccat tgatggaagc agctcgagaa ggacatgaag aaatggtggc attacttctt
1021 ggtcaaggag caaatatcaa tgcacagaca gaagaaactc aagaaactgc cttgactctg
1081 gcttgctgtg gaggctttct ggaagtggca gactttctaa ttaaggcagg agccgatata
1141 gaactagggt gttctacccc tttaatggaa gctgctcaag agggtcattt ggagttagtt
1201 aaatacttat tagctgcagg agctaacgtt catgcaacaa cagcaacagg ggatacagca
1261 ctaacatatg cctgtgaaaa tggtcatact gatgtagcag atgtcttact tcaggcaggc
1321 gcagatctgg aacatgaatc tgaaggtgga agaactcctt taatgaaagc tgcaagagct
1381 ggtcatgttt gtactgttca gttcttaatt agtaaaggag cgaatgtgaa tagaaccaca
1441 gctaataatg accatactgt actgtccctg gcttgtgcag ggggtcatct ggcagtggtg
1501 gaactacttt tggctcatgg ggcagatcct actcaccgtt tgaaagatgg ctcaactatg
1561 ttgatagaag cagcaaaagg tggccataca agtgttgttt gctatctctt ggattatcct
1621 aataacttgc tttcagcccc tccaccagat gtcactcagt taactccccc atcccacgat
1681 ttaaataggg ctcctcgtgt accagttcaa gcactgccca tggttgttcc acctcaggag
1741 cctgacaaac cacctgccaa tgttgccacc actcttccca tcaggaataa agctgcttct
1801 aaacaaaagt ccagcagcca tttgccagca aacagccagg atgtacaggg ttacatcacc
1861 aatcagtctc cagagagcat tgtagaagag gctcagggaa agttaacaga actggaacag
1921 aggataaaag aagccataga aaagaatgca cagctgcagt ccttggaact ggctcatgct
1981 gaccaactta ccaaggagaa gatcgaggag ctcaacaaaa caagggagga acaaattcag
2041 aagaaacaaa agattttgga ggaactacag aaagtagaac gagagttaca actgaaaact
2101 cagcagcagc taaaaaagca gtatctagag gttaaagctc aaagaattca acttcagcaa
2161 cagcagcaac agtcttgcca acacctggga ttactaactc ctgttggagt tggagagcag
2221 ctttctgagg gagactatgc acggttacag caagtggatc ctgttttact taaagatgaa
2281 ccccagcaga ctgctgctca gatgggtttt gcgccaatcc agcctctggc gatgcctcaa
2341 gctttgcctc tggcggcagg tcccttgcct ccagggtcca tcgcaaatct tacagaactc
2401 caagtcctat catctctcct tcagccatgc ttcctatcta ccctgccatt gatattgatg
2461 cacagactga gagtaatcat gacacggcgc taacacttgc ctgtgctggt ggccacgagg
2521 aactggtaca aacactgcta gagagaggag ctagtataga gcaccgagac aagaaaggtt
2581 ttactccact catcttggct gccacagctg gtcatgttgg tgttgtggaa atattgctgg
2641 acaatggtgc agacattgaa gcccagtctg aaagaaccaa ggacacacca ctctccttgg
2701 cttgttctgg gggaagacag gaggtggtgg agctattgtt agctcgaggg gcaaataaag
2761 agcacaggaa tgtttctgat tacacacctc taagtctggc tgcttctggt ggctatgtga
2821 acatcatcaa aatattacta aatgcaggag ctgagattaa ctctagaact ggtagcaaat
2881 tgggcatctc tcctctgatg ttagcagcta tgaatgggca tacagctgct gttaagctcc
2941 tgttagacat gggctctgac ataaatgctc agatagaaac caatcggaac actgccctta
3001 ctttagcctg cttccaagga agaactgaag tggttagtct tctgcttgat agaaaagcaa
3061 atgttgaaca cagagctaag actggtctca caccactaat ggaagctgcc tctggtggat
3121 atgcggaggt gggccgagtt cttttggata aaggtgctga tgttaatgcc cctccagttc
3181 cctcctcaag agatacagct ttaaccatag cagcagataa agggcattac aaattctgtg
3241 agcttcttat tggcagggga gctcatattg atgtacgtaa caagaagggg aacactccat
3301 tgtggctagc agcaaatggt ggacacctcg atgtggttca gttactggtg caagcaggtg
3361 cagatgtgga tgcagcagat aaccgcaaga taactcctct tatggcagca tttagaaagg
3421 gtcatgtgaa ggtggtgcgc tacttagtca aagaagtcaa tcagtttcca tcagattctg
3481 aatgtatgag atacatagca accatcactg ataaggagat gctgaagaag tgtcatcttt
3541 gtatggagtc aatagtacaa gccaaagata gacaggctgc tgaagcaaac aaaaacgcca
3601 gcattttgtt agaggagtta gacttggaaa agttaaggga agaaagtcgg aggctggctt
3661 tggctgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//