LOCUS BC007746 2031 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PBX/knotted 1 homeobox 1, mRNA (cDNA clone MGC:12791 IMAGE:4099156), complete cds. ACCESSION BC007746 VERSION BC007746.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2031) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2031) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007746.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: b Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37595550. FEATURES Location/Qualifiers source 1..2031 /db_xref="H-InvDB:HIT000033418" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12791 IMAGE:4099156" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2031 /gene="PKNOX1" /gene_synonym="pkonx1c" /gene_synonym="PREP1" /db_xref="GeneID:5316" /db_xref="HGNC:HGNC:9022" /db_xref="MIM:602100" CDS 19..1329 /gene="PKNOX1" /gene_synonym="pkonx1c" /gene_synonym="PREP1" /codon_start=1 /product="PBX/knotted 1 homeobox 1" /protein_id="AAH07746.1" /db_xref="GeneID:5316" /db_xref="HGNC:HGNC:9022" /db_xref="MIM:602100" /translation="MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSEPDAEGVSPPP VESQTPMDVDKQAIYRHPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEK EGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLL SGEPGSPYSPVQSQQIQSAITGTISPQGIVVPASALQQGNVAMATVAGGTVYQPVTVV TPQGQVVTQTLSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRS WLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKK KTAQNRPVQRFWPDSIASGVAQPPPSELTMSEGAVVTITTPVNMNVDSLQSLSSDGAT LAVQQVMMAGQSEDESVDSTEEDAGALAPAHISGLVLENSDSLQ" BASE COUNT 581 a 451 c 496 g 503 t ORIGIN 1 ataaaactct gatgaaccat gatggctaca cagacattaa gtatagacag ctatcaagat 61 gggcaacaga tgcaagtagt aacagagtta aagacagaac aagatccaaa ctgctctgaa 121 cccgatgcag aaggagtgag ccctccccct gtggagtctc agaccccgat ggatgtggac 181 aagcaggcca tttataggca tccactattt ccattattag ctttgttgtt tgaaaaatgt 241 gaacaatcta cacagggctc tgaaggcaca acttctgcca gttttgatgt agacatcgaa 301 aattttgtaa gaaagcaaga gaaggaaggg aaacctttct tttgtgaaga tccagaaacc 361 gataatttaa tggtaaaagc aatccaggtt ttgcgcattc atcttcttga gctggaaaag 421 gttaacgaac tctgcaaaga tttctgcagt cgatacattg cttgtctgaa aacaaaaatg 481 aacagtgaaa ctctgttgag tggagagcct ggaagcccgt actcaccagt gcagtcccag 541 cagattcaaa gtgccatcac aggcaccatc agccctcagg gaattgtggt gccggcgtcc 601 gcgctgcagc agggaaacgt agccatggcg acggtggcag gtggcacagt gtatcagcct 661 gtcacggtcg tcactcccca aggccaagtg gtcacacaga cattgtcgcc tgggacaatt 721 aggatccaga actcccagct tcagttacag ttaaaccaag atctcagcat cttgcatcaa 781 gatgatggtt catctaagaa caagaggggc gtcctgccaa agcatgccac gaacgtgatg 841 cggtcctggc tcttccagca catcgggcat ccctacccaa cagaggatga gaaaaaacag 901 attgctgctc agacaaattt gacactactc caagtcaaca actggttcat caatgccaga 961 agacgaattc ttcagccaat gttggattca agttgttcag agacccccaa aacaaagaaa 1021 aaaactgctc agaaccggcc agttcagagg ttttggcctg attctattgc atcaggagtc 1081 gcacagccac cgccgagcga gctcaccatg tcggaaggag ctgttgtcac catcaccacg 1141 cccgtgaaca tgaacgtgga cagccttcag tctctgtcct cggacggggc caccctggcg 1201 gtgcagcagg tcatgatggc agggcagagc gaggacgagt ctgtggacag cacagaggag 1261 gatgcgggtg ccctggcccc tgcccacatc agcgggctgg tcttggagaa cagtgactcc 1321 ctgcagtagg ggcaggagca gacgcacctg actttttgga gtttgcacag caaacatttt 1381 acacagtttt atttctaata tgttttatat gtagatatag aagagtgcac ttttgtattt 1441 catagtaagc ttaaagcgcg tctttgccgg tgcagcgact tctttcaagt gtgtgtgtgt 1501 gtgtgtgtgt gcgtgtgtgc gtgtgtgtgg atttttaaag aaattcttta aaggtttaac 1561 gctagattgt gaggaatgac acaccactcc ctccccacct tgaatcccta attagattaa 1621 ggaatagcgc tgccattttc taaaccgtga tgcggttgtc acttagttct gtggttccag 1681 cagatctcag tgggctggtt gatttgtgtg gcccatggat ttgaaagaag ctgctgcacc 1741 cgaaactgcc agtgtgcggt gacaacggca cacgcctaga ctgagtgtgg tttcgtcgtg 1801 agtggatgga cggcaagctt agcaagccta agtcccctca tgttcagtga gcctgtttca 1861 tttgctatat agaaaaagaa actcctattt ttaccttgct ggaattattg gataaaaaag 1921 ctatttttat aaattcgtta tgaattggat gatgactata ttgaggataa aatttctaga 1981 gaagaaacaa tacatgcttg ctattaatat ttcaaaaaaa aaaaaaaaaa a //