LOCUS BC007738 2915 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens SAPS domain family, member 3, mRNA (cDNA clone
IMAGE:4122190), partial cds.
ACCESSION BC007738
VERSION BC007738.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2915)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2915)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007738.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: f Column: 17.
FEATURES Location/Qualifiers
source 1..2915
/db_xref="H-InvDB:HIT000033413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4122190"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2915
/gene="SAPS3"
/gene_synonym="FLJ11058"
/gene_synonym="SAP190"
/gene_synonym="SAPL"
/gene_synonym="SAPLa"
/db_xref="GeneID:55291"
/db_xref="HGNC:HGNC:1173"
/db_xref="IMGT/GENE-DB:1173"
/db_xref="MIM:1173"
CDS <1..677
/gene="SAPS3"
/gene_synonym="FLJ11058"
/gene_synonym="SAP190"
/gene_synonym="SAPL"
/gene_synonym="SAPLa"
/codon_start=3
/product="SAPS3 protein"
/protein_id="AAH07738.2"
/db_xref="GeneID:55291"
/db_xref="HGNC:HGNC:1173"
/db_xref="IMGT/GENE-DB:1173"
/db_xref="MIM:1173"
/translation="DSEEEDGAKQDLFEPSSANTEDKMEVDLSEPPNWSANFDVPMET
THGAPLDSVGSDVWSTEEPMPTKETGWASFSEFTSSLSTKDSLRSNSPVEMETSTEPM
DPLTPSAAALAVQPEAAGSVAMEASSDGEEDAESTDKVTETVMNGGMKETLSLTVDAK
TETAVFKSEEGKLSTSQDAACKDAEECPETAEAKCAAPRPPSSSPEQRTGQPSAPGDT
SVNGPV"
BASE COUNT 820 a 578 c 652 g 865 t
ORIGIN
1 cagactctga agaagaagat ggagcaaagc aagacttgtt tgaacccagc agtgccaaca
61 cggaggataa aatggaggtg gacctgagtg aaccacccaa ctggtcagct aactttgatg
121 tcccaatgga aacaacccac ggtgctccat tggattctgt gggatctgat gtctggagca
181 cagaggagcc gatgccaact aaagagacgg gctgggcttc tttttcagag ttcacgtctt
241 ccctgagcac aaaagattct ttaaggagta attctccagt ggaaatggaa accagcactg
301 aacccatgga ccctctgact cccagtgcgg ctgccctggc agtgcagcca gaagcggcag
361 gcagtgtggc catggaagcc agctctgacg gagaggagga tgcagaaagt acagacaagg
421 taactgagac agtgatgaat ggcggcatga aggaaacgct cagcctcact gtagatgcca
481 agacagagac tgcggtcttc aaaagtgagg aagggaaact gtctacctct caagatgctg
541 cttgtaaaga cgcagaggag tgtcccgaga ctgcagaggc gaagtgcgcg gcgcccaggc
601 ctcccagcag cagtcccgag cagaggactg gccaaccaag cgcaccaggt gacacttcag
661 tgaatggccc tgtatgacgg gtgacgtctg ctgctgctga ctgaggactg cagaccgcca
721 ccactcaggg gctctggagg ggtcagctgg agcccaccaa gctgtcactg ctgcactcac
781 tctgcaaggg atcaggacca gcaaccttta tattctagat tctaagacat tgtacagaga
841 aattcagaag tgtaaaaata ttgcacattg acaaatacca agaatttttg cgtatgttta
901 tattgtattg ttctaaataa tgggtagcct gtgaaataag atcttgccac ccatgtaata
961 atagtagtaa tactatagtt aaaatggctg taagaatagt tttataaaag tgaatacaca
1021 gatctattgt atttgaaaca taactttgac aattattagt gtgaccaaag tattaggcgg
1081 ttttcataca tttttcacct tgtacaaaat tatgaattca tttttcctcc aggccgacaa
1141 ggagttgtag aatgaaaatg ccctctaagt gttattttgg ttgttctaac ttacaaaagt
1201 gattttgaat aagaaatatt tggtgttctt tttataacca gtttttgatt ggtaattgtt
1261 ttctgtattg tttaaaacgg atcaaaaatg taagtctatt ggtagagatt aagtaaagta
1321 tttattgcta catcatagtt gataaattga tgttatcgta aagccatatg ttctgttcaa
1381 gtcttgtttg cttgaaatga ttattcctac aagtgaaaca ctagactatt tggagtgtat
1441 atggcttgtg ttttgggatt tttttttttt ttttttggct tttgtttttg tttgtttttt
1501 tgtttcattt ggtagttcat ctgcctttta acccattcac caaaatttac cttgttaaca
1561 agcatcacca atgaacattt cagagcaatc tgcatattta acagacctaa aataaatcct
1621 attaggcaag tcagttgaaa atgctcgtgc tgctaatgga attagagtgc gttcatttta
1681 caggctagta ttttaaaagt agaaatcaaa atctggcacc gaagcatgct aattgtttac
1741 tgtaccttgt gaggttttca ctcataaatt taaaccagtg tattttttta gaactggttt
1801 gtgtatatat atagtgatta tggatactaa ttcaatgtaa tttataattt tctatgtcaa
1861 tacaaaaata catcacagcc ttctcaaaca gctcaagcaa tatattgtat attgccatat
1921 cgtctggtga aagggttaaa ttacttcacc tcttgcactt ttagatgcaa atcagttttt
1981 catttctgta atagaaaatt attcacgtat ttttacatca tttgtttttc ctgaccagta
2041 tttaaaacca aaaggatatt ctgaaaaatg gccaacaatt tttttagaag tagcatccca
2101 agcagcgtgc ctaaacatta cattgcatat ggaaataaaa gaatcaaacg tctaatgcct
2161 tattatttct gatttccttt ttcattttaa gtggtgtgga gattccagca ctcccaggac
2221 agtggagtca gcagtaagcc ctgggacagg tggcaagggt gggtcccttg acctttgcac
2281 gcctcctcag gaaccccctt tcccgggtga gcccctctct gaagagactg tccttgggcc
2341 tcctctggaa gcagcacccc cagaggacag ggctcctcct gcttgcctca gggctgcctg
2401 acttgaatgg cgttggacct cggggattac tggtagataa tatgctctgg tctcgcctgg
2461 tggtgagttt tgccagccat ggccagggtt tggctccact ggtggcacac gtggcctccg
2521 tggtatggac ctggtggctt ctccatccca ctgtggcctc tgtggtatgg acctggtggc
2581 ttctccatcc tacccaaggt aacagtgtct tgcttcatcc cactgactgc tgggagagag
2641 cctctgggac ttttctttgg ggcatcattt tgttttgtct ttcgtagcag ggaaaggata
2701 tgacaatggg gaggacagtt cttttggagg ttggaggggc caagccaagg acaggagcaa
2761 gtgtgccctc attttgtttc tacttttaat ttctgtgtgt tggccatact gaattatgag
2821 actaacagat gtctacaata caatacctgt attcaaaata acaaaaataa agcctgattc
2881 tttgtttcta gaaaaaaaaa aaaaaaaaaa aaaaa
//