LOCUS BC007709 2756 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens slingshot homolog 3 (Drosophila), mRNA (cDNA clone
MGC:10299 IMAGE:4053628), complete cds.
ACCESSION BC007709
VERSION BC007709.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2756)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2756)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24586672.
FEATURES Location/Qualifiers
source 1..2756
/db_xref="H-InvDB:HIT000258921"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10299 IMAGE:4053628"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2756
/gene="SSH3"
/gene_synonym="FLJ10928"
/gene_synonym="FLJ20515"
/gene_synonym="SSH-3"
/db_xref="GeneID:54961"
/db_xref="HGNC:HGNC:30581"
/db_xref="MIM:606780"
CDS 58..2037
/gene="SSH3"
/gene_synonym="FLJ10928"
/gene_synonym="FLJ20515"
/gene_synonym="SSH-3"
/codon_start=1
/product="slingshot homolog 3 (Drosophila)"
/protein_id="AAH07709.1"
/db_xref="GeneID:54961"
/db_xref="HGNC:HGNC:30581"
/db_xref="MIM:606780"
/translation="MALVTVSRSPPGSGASTPVGPWDQAVQRRSRLQRRQSFAVLRGA
VLGLQDGGDNDDAAEASSEPTEKAPSEEELHGDQTDFGQGSQSPQKQEEQRQHLHLMV
QLLRPQDDIRLAAQLEAPRPPRLRYLLVVSTREGEGLSQDETVLLGVDFPDSSSPSCT
LGLVLPLWSDTQVYLDGDGGFSVTSGGQSRIFKPISIQTMWATLQVLHQACEAALGSG
LVPGGSALTWASHYQERLNSEQSCLNEWTAMADLESLRPPSAEPGGSSEQEQMEQAIR
AELWKVLDVSDLESVTSKEIRQALELRLGLPLQQYRDFIDNQMLLLVAQRDRASRIFP
HLYLGSEWNAANLEELQRNRVTHILNMAREIDNFYPERFTYHNVRLWDEESAQLLPHW
KETHRFIEAARAQGTHVLVHCKMGVSRSAATVLAYAMKQYECSLEQALRHVQELRPIA
RPNPGFLRQLQIYQGILTASRQSHVWEQKVGGVSPEEHPAPEVSTPFPPLPPEPEGGG
EEKVVGMEESQAAPKEEPGPRPRINLRGVMRSISLLEPSLELESTSETSDMPEVFSSH
ESSHEEPLQPFPQLARTKGGQQVDRGPQPALKSRQSVVTLQGSAVVANRTQAFQEQEQ
GQGQGQGEPCISSTPRFRKVVRQASVHDSGEEGEA"
BASE COUNT 578 a 898 c 808 g 472 t
ORIGIN
1 ggcacgaggg gaaggggccg tgcccggtgc cagcccaggt gctcgcggcc tggctccatg
61 gccctggtca cagtgagccg ttcgcccccg ggcagcggcg cctccacgcc cgtggggccc
121 tgggaccagg cggtccagcg aaggagtcga ctccagcgaa ggcagagctt tgcggtgctc
181 cgtggggctg tcctgggact gcaggatgga ggggacaatg atgatgcagc agaggccagt
241 tctgagccaa cagagaaggc cccgagtgag gaggagctcc acggggacca gacagacttc
301 gggcaaggat cccagagtcc ccagaagcag gaggagcaga ggcagcacct gcacctcatg
361 gtacagctgc tgaggccgca ggatgacatc cgcctggcag cccagctgga ggcaccccgg
421 cctccccggc tccgctacct gctggtagtt tctacacgag aaggagaagg tctgagccag
481 gatgagacgg tcctcctggg cgtggatttc cctgacagca gctcccccag ctgcaccctg
541 ggcctggtct tgcccctctg gagtgacacc caggtgtact tagatggaga cgggggcttc
601 agcgtgacgt ctggtgggca aagccggatc ttcaagccca tctccatcca gaccatgtgg
661 gccacactcc aggtattgca ccaagcatgt gaggcagctc taggcagcgg ccttgtaccg
721 ggtggcagtg ccctcacctg ggccagccac taccaggaga gactgaactc cgaacagagc
781 tgcctcaatg agtggacggc tatggccgac ctggagtctc tgcggcctcc cagcgccgag
841 cctggcgggt cctcagaaca ggagcagatg gagcaggcga tccgtgctga gctgtggaaa
901 gtgttggatg tcagtgacct ggagagtgtc acttccaaag agatccgcca ggctctggag
961 ctgcgcctgg ggctccccct ccagcagtac cgtgacttca tcgacaacca gatgctgctg
1021 ctggtggcac agcgggaccg agcctcccgc atcttccccc acctctacct gggctcagag
1081 tggaacgcag caaacctgga ggagctgcag aggaacaggg tcacccacat cttgaacatg
1141 gcccgggaga ttgacaactt ctaccctgag cgcttcacct accacaatgt gcgcctctgg
1201 gatgaggagt cggcccagct gctgccgcac tggaaggaga cgcaccgctt cattgaggct
1261 gcaagagcac agggcaccca cgtgctggtc cactgcaaga tgggcgtcag ccgctcagcg
1321 gccacagtgc tggcctatgc catgaagcag tacgaatgca gcctggagca ggccctgcgc
1381 cacgtgcagg agctccggcc catcgcccgc cccaaccctg gcttcctgcg ccagctgcag
1441 atctaccagg gcatcctgac ggccagccgc cagagccatg tctgggagca gaaagtgggt
1501 ggggtctccc cagaggagca cccagcccct gaagtctcta caccattccc acctcttccg
1561 ccagaacctg agggtggtgg ggaggagaag gttgtaggca tggaagagag ccaggcagcc
1621 ccgaaagaag agcctgggcc acggccacgt ataaacctcc gaggggtcat gaggtccatc
1681 agtcttctgg agccctcctt ggagctggag agcacctcag agaccagtga catgccagag
1741 gtcttctctt cccacgagtc ttcacatgaa gagcctctgc agcccttccc acagcttgca
1801 aggaccaagg gaggccagca ggtggacagg gggcctcagc ctgccctgaa gtcccgccag
1861 tcagtggtta ccctccaggg cagtgccgtg gtggccaacc ggacccaggc cttccaggag
1921 caggagcagg ggcaggggca ggggcaggga gagccctgca tttcctctac gcccaggttc
1981 cggaaggtgg tgagacaggc cagcgtgcat gacagtggag aggagggcga ggcctgagcc
2041 ctcacacatg cccacgctcc cctgacactg aagaggatcc acaactcctt ggagaaacac
2101 cctcacgtct gttgccgcac acattcctct cagctccgcc ccatacccgt cactacagcc
2161 tcacctccca cccctgtcac tacggcctca cctcccaccc ctgtcactac agcctcacct
2221 cctacagcct taagtcccag gcccatgtct gcctgtccaa gggctcaaga ctttctaact
2281 gggatgtggt agagggactg aaggtacctt tgggggcaac agcaccctag tttcattctc
2341 aactctagcc ctgcacactc acctgtggca cggaatgaaa acagagcttc ccgtgcaaaa
2401 agggtcacgc ctcccacccc cgccccctcc ctgcacctcc tgtcctctcc cagttcattc
2461 ctggaaccag ccaggccagg caaccagtgg cccccaaagg caggcaggat cctcaggccc
2521 cagccgcggg aggctggaag ggctggcaga tcgcttccct catccacctc caccggtcca
2581 ggtctttgct gctgtcccca gacctcctgt gacaccacgc cagatcacag ggcaccaggc
2641 cagagatagt cttctttttg tcctttctgg cctctggcta gtcagttttt catagcctta
2701 cagtatctgg ctttgtactg agaaataaaa cacattttca taaaaaaaaa aaaaaa
//