LOCUS BC007699 1330 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens TSR2, 20S rRNA accumulation, homolog (S. cerevisiae),
mRNA (cDNA clone IMAGE:3953868), partial cds.
ACCESSION BC007699
VERSION BC007699.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308387.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000086891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3953868"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1330
/gene="TSR2"
/gene_synonym="DT1P1A10"
/gene_synonym="MGC20451"
/gene_synonym="RP1-112K5.2"
/db_xref="GeneID:90121"
/db_xref="HGNC:HGNC:25455"
CDS <1..578
/gene="TSR2"
/gene_synonym="DT1P1A10"
/gene_synonym="MGC20451"
/gene_synonym="RP1-112K5.2"
/codon_start=3
/product="TSR2 protein"
/protein_id="AAH07699.1"
/db_xref="GeneID:90121"
/db_xref="HGNC:HGNC:25455"
/translation="MAGAAEDARALFRAGVCAALEAWPALQIAVENGFGGVHSQEKAK
WLGGAVEDYFMRNADLELDEVEDFLGELLTNEFDTVVEDGSLPQVSQQLQTMFHHFQR
GDGAALREMASCITQRKCKVTATALKTARETDEDEDDVDSVEEMEVTATNDGAATDGV
CPQPEPSDPDAQTIKEEDIVEDGWTIVRRKK"
BASE COUNT 299 a 298 c 418 g 315 t
ORIGIN
1 taatggcggg cgctgcagaa gatgcgcgag ctcttttccg ggctggggtc tgcgcggccc
61 tggaggcctg gccggccttg cagatcgctg tggagaatgg cttcgggggt gtgcacagcc
121 aggagaaggc caagtggctg gggggtgcag tggaggatta cttcatgcgc aatgctgact
181 tggagctaga tgaggtggaa gacttccttg gagagctgtt gaccaacgag tttgatacag
241 ttgtggaaga cgggagtctg ccccaggtga gccagcaact gcagaccatg ttccaccact
301 tccagagggg tgatggggct gctctgaggg agatggcctc ctgcatcact cagagaaaat
361 gcaaggtcac agccactgca cttaagacag ctagagagac tgatgaggat gaagatgatg
421 tggacagtgt ggaagagatg gaggtcacag ctacgaatga tggggctgct acagatgggg
481 tctgccccca gcctgaaccc tctgatccag acgctcagac tattaaggaa gaggatatag
541 tggaagatgg ctggaccatt gtccggagaa aaaaatgagt ggggatgatt ggaaatggct
601 ttgggccctt atttgctgtt ctaagagttg tctgtagggg tttttttttt gaggattgca
661 gacctgtgga ctggttaccc catctccacc ctctcccctg ttcctctgtc tggctccctc
721 cagggcaagg aaaacctagg gtccttggtc ttgggggtgg ggggaccttt tccagcatat
781 tcccctgggc ctttagttaa catccgagtg acgaagccgg gttccccagt acagtgtctt
841 ttgggtgcgg tcattgtgag gaaggggatg agtgagtgtg ggtgtggctg gaggaggagc
901 tagatgccgg tggacagtgg gcaggtggat ttggggagga gaggatcagc agcagcagca
961 gtactcagtg atagggggct ggctgggtca ggaatggtga gatgaacatg caagtggaag
1021 agagaatagt tgaaaatgtg aatgaaagta gctctggagc ctctccctta ccccacccca
1081 cacacacgca acagctctgt acccctgccc agaacttgga acctcccagg aatgctgcct
1141 tccttcagcc cagcctccag tcctgggttc cctcaggaat tcgaagacct tggctaggtg
1201 gtgagcttgg aagagctggg ctttgttttc tgtctcctct aacctctttc cttactcctt
1261 atcccatccc atttgagttc aggggtgagg cttaagatct taataaataa taccttactg
1321 cttaaaaaaa
//