LOCUS BC007664 1292 bp mRNA linear HUM 08-DEC-2006 DEFINITION Homo sapiens chromosome 9 open reading frame 78, mRNA (cDNA clone MGC:866 IMAGE:3140172), complete cds. ACCESSION BC007664 VERSION BC007664.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1292) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1292) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC007664.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: e Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7706556. FEATURES Location/Qualifiers source 1..1292 /db_xref="H-InvDB:HIT000033364" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:866 IMAGE:3140172" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1292 /gene="C9orf78" /gene_synonym="bA409K20.3" /gene_synonym="HSPC220" /db_xref="GeneID:51759" /db_xref="HGNC:HGNC:24932" CDS 26..895 /gene="C9orf78" /gene_synonym="bA409K20.3" /gene_synonym="HSPC220" /codon_start=1 /product="chromosome 9 open reading frame 78" /protein_id="AAH07664.1" /db_xref="GeneID:51759" /db_xref="HGNC:HGNC:24932" /translation="MPVVRKIFRRRRGDSESEEDEQDSEEVRLKLEETREVQNLRKRP NGVSAVALLVGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTSF SAETNRRDEDADMMKYIETELKKRKGIVEHEEQKVKPKNAEDCLYELPENIRVSSAKK TEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMA VNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNRKRPANEKATDD YHYEKFKKMNRRY" BASE COUNT 409 a 276 c 372 g 235 t ORIGIN 1 gctgtacaac tcggccgttg tcaccatgcc ggtcgtccgg aagattttcc gtcgccgccg 61 gggcgactcg gagtcagagg aagatgagca ggactcagag gaggttcgat taaaactgga 121 agagaccaga gaggtacaga acttgaggaa gaggcccaac ggggtgagtg ctgtggcctt 181 gctggtggga gagaaggtac aagaggagac cactctagtg gatgatccct ttcagatgaa 241 gacaggtggt atggtggata tgaagaaact gaaggaaagg ggcaaagata agatcagtga 301 ggaggaggac ctgcacctgg ggacatcgtt ttctgcagaa accaaccgaa gggatgagga 361 tgcagacatg atgaagtaca ttgagacaga gctaaagaag aggaaaggga tcgtggaaca 421 tgaggaacag aaagttaagc caaagaatgc agaggactgt ctttatgaac ttccagaaaa 481 catccgtgtt tcctcagcaa agaagaccga ggagatgctt tccaaccaga tgctgagtgg 541 cattcctgag gtggacctgg gcatcgatgc taaaataaaa aatatcattt ccacggagga 601 tgccaaggcc cgtctgctgg cagagcagca gaacaagaag aaagacagcg agacctcctt 661 cgtgcctacc aacatggctg tgaattatgt gcagcacaac agattttatc atgaggagct 721 caacgcgccc atacggagaa acaaagaaga gcccaaggcc cggcccttga gagtaggtga 781 cacggagaag ccagagcctg agcggtcccc tcctaaccgc aagcgtcctg ctaacgagaa 841 ggcaactgat gactatcatt atgagaagtt caagaaaatg aataggcggt actgagttgt 901 gcagagtggg atgtaaatat cgccttcctc tccctatatc cctcccatga aaaatggctt 961 cctggccggg cgtggtggct cctgcctgta atcccagcac tttgggaggc cgaggtgggc 1021 ggatcacctg aggtcgggag tttgagacca gcctgaccaa catggagaaa cccagtctct 1081 actgaaaata cagaaaagtt agccaggcgt ggtggcacat gcctgtaatc ccagctgctc 1141 aggaggctga ggcaggagaa ttgcttgaac ccaagaggcg gaggttgtgg tgagccgaga 1201 ttgcaccttt gtactccagc ctgggcaacg agcaaaaaac tctgtctcaa aaaaaaaaaa 1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //