LOCUS BC007662 1278 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens trafficking protein particle complex 3, mRNA (cDNA
clone MGC:2035 IMAGE:3051295), complete cds.
ACCESSION BC007662
VERSION BC007662.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1278)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1278)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007662.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222308.
FEATURES Location/Qualifiers
source 1..1278
/db_xref="H-InvDB:HIT000033363"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2035 IMAGE:3051295"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1278
/gene="TRAPPC3"
/gene_synonym="BET3"
/db_xref="GeneID:27095"
/db_xref="HGNC:HGNC:19942"
CDS 89..631
/gene="TRAPPC3"
/gene_synonym="BET3"
/codon_start=1
/product="trafficking protein particle complex 3"
/protein_id="AAH07662.1"
/db_xref="GeneID:27095"
/db_xref="HGNC:HGNC:19942"
/translation="MSRQANRGTESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQL
DKMGFNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDE
FSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGV
TEIRMRFIRRIEDNLPAGEE"
BASE COUNT 327 a 292 c 338 g 321 t
ORIGIN
1 gctgaggggc agcggcttag gctccggcgt ctgcaggggt cgccgagcta acccgtggct
61 aggcgagtgg ggcggggcgg ccggcaccat gtcgaggcag gcgaaccgtg gcaccgagag
121 caagaaaatg agctctgagc tcttcaccct gacctatggt gccctggtca cccagctatg
181 taaggactat gaaaatgatg aagatgtgaa taaacagctg gacaaaatgg gctttaacat
241 tggagtccgg ctgattgaag atttcttggc tcggtcaaat gttgggaggt gccatgactt
301 tcgggaaact gcggatgtca ttgccaaggt ggcgttcaag atgtacttgg gcatcactcc
361 aagcattact aattggagcc cagctggtga tgaattctcc ctcattttgg aaaataaccc
421 cttggtggac tttgtggaac ttcctgataa ccactcatcc cttatttatt ccaatctctt
481 gtgtggggtg ttgcggggag ctttggagat ggtccagatg gctgtggagg ccaagtttgt
541 ccaggacacc ctgaaaggag acggtgtgac agaaatccgg atgagattca tcaggcggat
601 tgaggacaat cttccagctg gagaggaata accatcccta caactcgagg atagccatca
661 ggagcactgt tggaatcagc aggcctctgt gctccctctg ccctccagaa ctcagtgact
721 cttgaacatg gatgttatat attcttataa cctgtttcca ttctccattc aaataaagag
781 cagactgcga tatagtccat ttaccccatg tgtgcacatt caggagcgac agtctctgcc
841 cccattccct tgagaggggc tggatgtaat cacctttggt tggactagaa agagctcaaa
901 ccattttaca ttcctgtttg aatttttcca aagcaaaact cactttgacc ccattaagag
961 gcaagcctgg cacatctatc cctgggcctt tagaaagcca tttgcctcaa atggctatag
1021 ggttgtgggg tggagggagg aagggctggg agggagtggg gaggaattgc tagctgtagt
1081 gtgacacatt gtagtgtttg ccaggaaagg agccagtcat gccggaaaca ctgacttctg
1141 ggaagccacc caggtctcat tcctccctgc tgttggaggc aacatctcct ctttttacag
1201 agggtacatc cttttttctt acaaattctt caataaagac acattcttga gtgaaatccc
1261 aaaaaaaaaa aaaaaaaa
//