LOCUS BC007623 869 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens LSM10, U7 small nuclear RNA associated, mRNA (cDNA clone MGC:15749 IMAGE:3357043), complete cds. ACCESSION BC007623 VERSION BC007623.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 869) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 869) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: a Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14249631. FEATURES Location/Qualifiers source 1..869 /db_xref="H-InvDB:HIT000033339" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15749 IMAGE:3357043" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..869 /gene="LSM10" /gene_synonym="MGC15749" /gene_synonym="MST074" /gene_synonym="MSTP074" /db_xref="GeneID:84967" /db_xref="HGNC:HGNC:17562" CDS 151..522 /gene="LSM10" /gene_synonym="MGC15749" /gene_synonym="MST074" /gene_synonym="MSTP074" /codon_start=1 /product="LSM10, U7 small nuclear RNA associated" /protein_id="AAH07623.1" /db_xref="GeneID:84967" /db_xref="HGNC:HGNC:17562" /translation="MAVSHSVKERTISENSLIILLQGLQGRVTTVDLRDESVAHGRID NVDAFMNIRLAKVTYTDRWGHQVKLDDLFVTGRNVRYVHIPDDVNITSTIEQQLQIIH RVRNFGGKGQGRWEFPPKNCK" BASE COUNT 214 a 250 c 239 g 166 t ORIGIN 1 ggacagagcg gcccggtcgc cggcatggtt tctccgtcct gctgcagccg gcgggaggca 61 gccagtccag gcgcccgcta gcttcggcgg cgacccagac ggggaaagcg gaaggaatgt 121 cgcgtgcaag caggcagctg gtgtggaaga atggcggtga gccattcagt gaaggagcgg 181 accatctctg agaacagcct gatcatccta ctgcagggcc tccagggccg ggtaaccact 241 gtggacctgc gggatgagag cgtggcccac ggacgcatag acaatgtcga tgctttcatg 301 aacatccgcc tggccaaagt cacctacacg gaccgttggg ggcatcaggt caagctggat 361 gacctctttg tgacaggccg caatgtccgc tacgtccaca tcccagatga cgtgaacatc 421 acctcgacca ttgagcagca gctgcagatt atccatcggg tgcgaaactt tggtggcaag 481 ggccaaggcc ggtgggaatt tcccccaaaa aactgtaagt gaggccctca gcaagccctg 541 gccccaactc ggagtcctcc agtgatctcc agagctagtt ccctgccctc acaccctgtc 601 tggtacccga gaagaaagca gggccaggcc agaagctggt gtccaacaga caccacctgt 661 caaagctgcc tttcacaggg ttccacctcc cagactcact ctgggaccca gaatcctata 721 tgtggccttg gggtaggtga caatccccct ttttgatgat ctgaatctct gacttattga 781 ttatggaacc tgtcaagtag ttttcaactc tcccagtgag gataattaaa catgctcagc 841 ctgagccacc aaaaaaaaaa aaaaaaaaa //