LOCUS BC007618 1881 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens immunoglobin superfamily, member 21, mRNA (cDNA clone
MGC:15730 IMAGE:3355289), complete cds.
ACCESSION BC007618
VERSION BC007618.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1881)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1881)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543152.
FEATURES Location/Qualifiers
source 1..1881
/db_xref="H-InvDB:HIT000033336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15730 IMAGE:3355289"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1881
/gene="IGSF21"
/gene_synonym="MGC15730"
/gene_synonym="RP11-121A23.1"
/db_xref="GeneID:84966"
/db_xref="HGNC:HGNC:28246"
CDS 304..1707
/gene="IGSF21"
/gene_synonym="MGC15730"
/gene_synonym="RP11-121A23.1"
/codon_start=1
/product="immunoglobin superfamily, member 21"
/protein_id="AAH07618.1"
/db_xref="GeneID:84966"
/db_xref="HGNC:HGNC:28246"
/translation="MRTAPSLRRCVCLLLAAILDLARGYLTVNIEPLPPVVAGDAVTL
KCNFKTDGRMREIVWYRVTDGGTIKQKIFTFDAMFSTNYSHMENYRKREDLVYQSTVR
LPEVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSR
YQAQNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRPFRSLLHR
DLDDTKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVVSREFPR
WVHSAEPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALSMPMQA
EVTLVAPKGPKIVMTPSRARVGDTVRILVHGFQNEVFPEPMFTWTRVGSRLLDGSAEF
DGKELVLERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSIGPT
GARLTLVLALTVILELT"
BASE COUNT 381 a 650 c 526 g 324 t
ORIGIN
1 ccgatcggac tctgggccgc ggtgggcacc gcgcgcagct agggagccga gaaccgcggc
61 gagccccgag gacgcccaga gcgcgagggt cgctgcgcct cgcagagccg gagccgagtc
121 gagccgggcg cccgggctgc ctggccgcgg cggcatgggg gcgcccccgc ggctctccgc
181 gctgcccgcc accgcctcgg ccagtggccg gaggcaggag cgcgtctgag cccatggcga
241 ggggacccgc cgccaccgcc tccacccccg ccgccccgcc accgccgcca gctcccgggc
301 accatgcgaa ccgccccgag cctccgccgc tgcgtctgcc tgctgctcgc cgcgatcctg
361 gacctggcgc gcggctacct gacagtcaac attgagcctc tcccccctgt ggtggctgga
421 gacgccgtga ctttgaagtg taacttcaag acagatgggc gcatgcggga gatcgtgtgg
481 taccgggtga cggatggtgg caccatcaag caaaagatct tcaccttcga cgccatgttc
541 tccaccaact actcacacat ggagaactac cgcaagcgag aggacctggt gtaccagtcc
601 actgtgaggc tgcccgaggt ccggatctca gacaatggtc cctatgagtg ccatgtgggc
661 atctacgacc gcgccaccag ggagaaggtg gtcctggcat caggcaacat cttcctcaac
721 gtcatggctc ctcccacctc cattgaagtg gtggctgctg acacaccagc ccccttcagc
781 cgctaccaag cccagaactt cacgctggtc tgcatcgtgt ctggaggaaa accagcaccc
841 atggtttatt tcaaacgaga tggggaacca atcgacgcag tgcccctatc agagccacca
901 gctgcgagct ccggccccct acaggacagc aggcccttcc gcagccttct gcaccgtgac
961 ctggatgaca ccaagatgca gaagtcactg tccctcctgg acgccgagaa ccggggtggg
1021 cgaccctaca cggagcgccc ctcccgtggc ctgaccccag atcccaacat cctcctccag
1081 ccaaccacag agaacatacc agagacggtc gtgagccgtg agtttccccg ctgggtccac
1141 agcgccgagc ccacctactt cctgcgccac agccgcaccc cgagcagtga cggcactgtg
1201 gaagtacgtg ccctgctcac ctggaccctc aacccacaga tcgacaacga ggccctcttc
1261 agctgcgagg tcaagcaccc agctctgtcg atgcccatgc aggcagaggt cacgctggtt
1321 gcccccaaag gacccaaaat tgtgatgacg cccagcagag cccgggtagg ggacacagtg
1381 aggattctgg tccatgggtt tcagaacgaa gtcttcccgg agcccatgtt cacgtggacg
1441 cgggttggga gccgcctcct ggacggcagc gctgagttcg acgggaagga gctggtgctg
1501 gagcgggttc ccgccgagct caatggctcc atgtatcgct gcaccgccca gaacccactg
1561 ggctccaccg acacgcacac ccggctcatc gtgtttgaaa acccaaatat cccaagagga
1621 acggaggact ctaatggttc cattggcccc actggtgccc ggctcacctt ggtgctcgcc
1681 ctgacagtga ttctggagct gacgtgaagg cacccgcccc ggccactcca tcaggcactg
1741 acatctccgc gaccggtttt catttctttt ctaaactatt tccagtcttg ttcttagtct
1801 ctttccatct gtgtcttggc ttcttcagtc ggtttaatta aaacaaacag aacaattttc
1861 cccaaaaaaa aaaaaaaaaa a
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