LOCUS BC007610 2108 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens splicing factor 3b, subunit 2, 145kDa, mRNA (cDNA clone MGC:15693 IMAGE:3351485), complete cds. ACCESSION BC007610 VERSION BC007610.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2108) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2108) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: n Column: 4. FEATURES Location/Qualifiers source 1..2108 /db_xref="H-InvDB:HIT000033330" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15693 IMAGE:3351485" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2108 /gene="SF3B2" /gene_synonym="SAP145" /gene_synonym="SF3b1" /gene_synonym="SF3B145" /gene_synonym="SF3b150" /db_xref="GeneID:10992" /db_xref="MIM:605591" CDS 1..1911 /gene="SF3B2" /gene_synonym="SAP145" /gene_synonym="SF3b1" /gene_synonym="SF3B145" /gene_synonym="SF3b150" /codon_start=1 /product="SF3B2 protein" /protein_id="AAH07610.1" /db_xref="GeneID:10992" /db_xref="MIM:605591" /translation="MDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDARSS LGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGSD SPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAP KKKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEM HDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQE MREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYE GKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIP GLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWG ELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELR KKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVE VALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDS RGGSKKYKEFKF" misc_feature 586..1323 /gene="SF3B2" /gene_synonym="SAP145" /gene_synonym="SF3b1" /gene_synonym="SF3B145" /gene_synonym="SF3b150" /note="CUS1; Region: COG5182, CUS1, Splicing factor 3b, subunit 2 [RNA processing and modification]" /db_xref="CDD:COG5182" BASE COUNT 636 a 484 c 598 g 390 t ORIGIN 1 atggatgacc cctctgtggg ccccaagatc ccccaggctt tggagaagat cctgcagctg 61 aaggagagcc gccaggaaga gatgaattct cagcaggagg aagaggaaat ggaaacagat 121 gctcgctcgt ccctgggcca gtcagcgtca gagactgagg aggacacagt gtccgtatct 181 aaaaaggaga aaaaccggaa gcgtaggaac cgaaagaaga agaaaaagcc ccagcgggtg 241 cgaggggtgt cctctgagag ctctggggac cgggagaaag actcaacccg gtcccgtggc 301 tctgattccc cagcagctga tgttgagatt gagtatgtga ctgaagaacc tgaaatttac 361 gagcccaact ttatcttctt taagaggatc tttgaggctt ttaagctcac tgatgatgtg 421 aagaaggaga aagagaaaga gccagagaaa cttgacaaac tggagaactc tgcagccccc 481 aagaagaagg gatttgaaga ggagcacaag gacagtgatg atgacagcag tgatgacgag 541 caggaaaaga agccagaagc ccccaagctg tccaagaaga agttgcgccg aatgaaccgc 601 ttcactgtgg ctgaactcaa gcagctggtg gctcggcccg atgtcgtgga gatgcacgat 661 gtgacagcgc aggaccctaa gctcttggtt cacctcaagg ccactcggaa ctctgtgcct 721 gtgccacgcc actggtgttt taagcgcaaa tacctgcagg gcaaacgggg cattgagaag 781 ccccccttcg agctgccaga cttcatcaaa cgcacaggca tccaggagat gcgagaggcc 841 ctgcaggaga aggaagaaca gaagaccatg aagtcaaaaa tgcgagagaa agttcggcct 901 aagatgggca aaattgacat cgactaccag aaactgcatg atgccttctt caagtggcag 961 accaagccaa agctgaccat ccatggggac ctgtactatg aggggaagga gttcgagaca 1021 cgactgaagg agaagaagcc aggagatctg tctgatgagc taaggatttc cttggggatg 1081 ccagtaggac caaatgccca caaggtccct cccccatggc tgattgccat gcagcgatat 1141 ggaccacccc catcgtatcc caacctgaaa atccctgggc tgaactcgcc catccctgag 1201 agctgttcct ttgggtacca tgctggtggc tggggcaaac ctccagtgga tgagactggg 1261 aaaccgctct atggggacgt gtttggaacc aatgctgctg aatttcagac caagactgag 1321 gaagaagaga ttgatcggac cccttggggg gaactggaac catctgatga agaatcctca 1381 gaagaagagg aagaggaaga aagtgatgaa gacaaaccag atgagacagg ctttattacc 1441 cctgcagaca gtggccttat cactcctgga ggcttttcat cagtgcctgc tggaatggag 1501 acccctgaac tcattgagct gaggaagaag aagattgagg aggcgatgga cggaagtgag 1561 acacctcagc tcttcactgt gttgccagag aagagaacag ccactgttgg aggggccatg 1621 atgggatcaa cccacattta tgacatgtcc acggttatga gccggaaggg cccggctcct 1681 gagctgcaag gtgtggaagt ggcgctggcg cctgaagagt tggagctgga tcctatggcc 1741 atgacccaga agtatgagga gcatgtgcgg gagcagcagg ctcaagtaga gaaggaggac 1801 ttcagtgaca tggtggctga gcacgctgcc aaacagaagc aaaaaaaacg gaaagctcag 1861 ccccaggaca gccgtggggg cagcaagaaa tataaggagt tcaagtttta ggtcccctca 1921 cactagccct ttttttggcc ctacgtctgg atgcctgggc ttcacacaag aaccacctct 1981 cccgcagttc ccaaggactt gtcatttcat gttcttattt tagacctgtt ttgtaaataa 2041 agctgtttcc caaggaaaga gatgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2101 aaaaaaaa //