LOCUS BC007602 1974 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polycomb group ring finger 6, mRNA (cDNA clone
MGC:15678 IMAGE:3350074), complete cds.
ACCESSION BC007602
VERSION BC007602.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58761529.
FEATURES Location/Qualifiers
source 1..1974
/db_xref="H-InvDB:HIT000033324"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15678 IMAGE:3350074"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1974
/gene="PCGF6"
/gene_synonym="MBLR"
/gene_synonym="MGC15678"
/gene_synonym="MGC17541"
/db_xref="GeneID:84108"
/db_xref="HGNC:HGNC:21156"
/db_xref="MIM:607816"
CDS 14..847
/gene="PCGF6"
/gene_synonym="MBLR"
/gene_synonym="MGC15678"
/gene_synonym="MGC17541"
/codon_start=1
/product="polycomb group ring finger 6"
/protein_id="AAH07602.1"
/db_xref="GeneID:84108"
/db_xref="HGNC:HGNC:21156"
/db_xref="MIM:607816"
/translation="MEGVAVVTAGSVGAAKTEGAAALPPPPPPPVSPPALTPAPAAGE
EGPAPLSETGAPGCSGSRPPELEPERSLGRFRGRFEDEDEELEEEEELEEEEEEEEED
MSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSC
IVRHFYYSNRCPKCNIVVHQTQPLYNISANEGTGHFKPLEKKFVRVSGEATIGHVEKF
LRRKMGLDPACQVDIICGDHLLEQYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPLKI
T"
BASE COUNT 573 a 365 c 448 g 588 t
ORIGIN
1 gtctctcccg accatggagg gggtcgcggt ggtgacggcg ggcagcgtag gcgctgccaa
61 aaccgaggga gctgcagcct tgccgcctcc gcctccgcct cctgtctccc cgcccgccct
121 cacccctgca cccgcagcgg gtgaggaggg accggcgcct ctgtctgaga cgggggctcc
181 cggctgctcc ggctcccggc cccctgagct ggagccggag cgcagcctgg gccgcttcag
241 aggccgcttc gaggacgagg acgaggagtt ggaagaagaa gaggagctgg aggaggaaga
301 agaggaggag gaggaggaca tgagtcactt ctcgttgagg ctggagggag gccggcagga
361 ctcggaggac gaggaggagc gcctgattaa tctctctgag ctgaccccat acatcttgtg
421 ttccatttgc aaaggttact taatagatgc aactaccatc acagaatgtc ttcatacctt
481 ttgtaaaagc tgcatcgtaa gacattttta ctacagcaac agatgtccaa aatgcaatat
541 agtagtacat cagacacaac ctctttataa cataagtgct aatgaaggca cgggacattt
601 taagccattg gaaaagaagt ttgttcgagt ttcaggagaa gcaactattg gacatgtaga
661 aaaattcctc agaagaaaaa tgggtcttga tccagcttgt caggtagata taatctgtgg
721 tgatcacctg ttggagcagt atcaaactct aagggaaatc cgacgtgcaa taggtgatgc
781 agcaatgcag gatggtctgc ttgtccttca ttatggtctt gtggtttctc ctctgaagat
841 aacttgaaga ttctaggcac attatgagga gggaaacaaa ggaggcttct gcaggactgc
901 atctcaccaa agatttccat gaaatgtaat tgctaccact ttgctgttca agacataact
961 tacctatttt tagcaccaag aattatagcg tttataagta caacttggaa cgatggaatg
1021 catctgttac tagagactgt atataaaaag cagccaaagc tcaggggaaa tttttcaaaa
1081 attgaatttt aaaatttctt atgattttaa ataccttgac attgattttg cttcccatct
1141 ttgaagtaat tggttagttt tctttgttca gccatttcaa gttggtggtt gggatatctg
1201 ctctctggga tggcatcagt tgggcagtca tctttttgga agagaagtgt gcttttgagt
1261 ggaagattca aagccagtct ttgttaaact gcagggtgta ctctcaaaga ccaaaactat
1321 tggccacttt tgtatgttgc cagcatattt tgaacttgta ccttttttta tactagcaac
1381 actacaaagg agaagttact catttcaaaa tggatgaatt gttattatgt gtgaagagac
1441 tctgagttta tgatctgtgc cataaaattt cagtgtaata agacttcttc aatacatctt
1501 ccaataaggg gtgcttcttt gtgacagtat ttttatttct gacattcatt ttatttgggt
1561 acatagtgtg gttgttgata ccttgcaata gtattgcttc tgaaagtaat aaaaaatttt
1621 aggagaattt gagaagttta cagaattact tattcattgt tttcttagta agtcagttta
1681 atgtttattt ttctcattat ttcatcactg caataaagaa taagggtgtt tgagctcacc
1741 tccatgcaaa gacttcagtt ttaaaacatt atttgcctaa aattagcatt gtgatgcttt
1801 ctgaaagaaa tattttataa atcctgttta acagcagaat ttctgaatgt gtagagacta
1861 ctacaaaatt ggaaaaagat tggcaattct ttgtaaagaa tttgtgaatt gtgtataaat
1921 ttattctaac atttaataaa aatgtatttt aacctaaaaa aaaaaaaaaa aaaa
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