LOCUS BC007597 4133 bp mRNA linear HUM 12-JUL-2001
DEFINITION Homo sapiens, Similar to plectin 1, intermediate filament binding
protein, 500kD, clone IMAGE:3346810, mRNA, partial cds.
ACCESSION BC007597
VERSION BC007597.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4133)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: l Column: 8.
FEATURES Location/Qualifiers
source 1..4133
/db_xref="H-InvDB:HIT000086858"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3346810"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS <1..3090
/codon_start=1
/product="Similar to plectin 1, intermediate filament
binding protein, 500kD"
/protein_id="AAH07597.1"
/translation="ENLTYRQLLERCVEDPETGLRLLPLKGAEKAEVVETTQVYTEEE
TRRAFEETQIDIPGGGSHGGSTMSLWEVMQSDLIPEEQRAQLMADFQAGRVTKERMII
IIIEIIEKTEIIRQQGLASYDYVRRRLTAEDLFEARIISLETYNLLREGTRSLREALE
AESAWCYLYGTGSVAGVYLPGSRQTLSIYQALKKGLLSAEVARLLLEAQAATGFLLDP
VKGERLTVDEAVRKGLVGPELHDRLLSAERAVTGYRDPYTEQTISLFQAMKKELIPTE
EALRLLDAQLATGGIVDPRLGFHLPLEVAYQRGYLNKDTHDQLSEPSEVRSYVDPSTD
ERLSYTQLLRRCRRDDGTGQLLLPLSDARKLTFRGLRKQITMEELVRSQVMDEATALQ
LREGLTSIEEVTKNLQKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLE
AQAATGYVIDPIKGLKLTVEEAVRMGIVGPEFKDKLLSAERAVTGYKDPYSGKLISLF
QAMKKGLILKDHGIRLLEAQIATGGIIDPEESHRLPVEVAYKRGLFDEEMNEILTDPS
DDTKGFFDPNTEENLTYLQLMERCITDPQTGLCLLPLKEKKRERKTSSKSSVRKRRVV
IVDPETGKEMSVYEAYRKGLIDHQTYLELSEQECEWEEITISSSDGVVKSMIIDRRSG
RQYDIDDAIAKNLIDRSALDQYRAGTLSITEFADMLSGNAGGFRSRSSSVGSSSSYPI
SPAVSRTQLASWSDPTEETGPVAGILDTETLEKVSITEAMHRNLVDNITGQRLLEAQA
CTGGIIDPSTGERFPVTDAVNKGLVDKIMVDRINLAQKAFCGFEDPRTKTKMSAAQAL
KKGWLYYEAGQRFLEVQYLTGGLIEPDTPGRVPLDEALQRGTVDARTAQKLRDVGAYS
KYLTCPKTKLKISYKDALDRSMVEEGTGLRLLEAAAQSTKGYYSPYSVSGSGSTAGSR
TGSRTGSRAGSRRGSFDATGSGFSMTFSSSSYSSSGYGRRYASGSSASLGGPESAVA"
BASE COUNT 757 a 1424 c 1265 g 687 t
ORIGIN
1 gagaacctca cgtacaggca gctgctggag cggtgcgtgg aggaccccga gacgggcttg
61 cgccttctgc cactgaaagg ggcggagaag gctgaggtgg tggagaccac gcaggtgtac
121 actgaggagg agacaagaag ggcatttgaa gagacacaga tcgacattcc cggcggcggc
181 agccacggcg gctccaccat gtccctgtgg gaggtgatgc agtcggacct gatccccgag
241 gagcagcggg cccagctgat ggctgacttc caggccggcc gggtgaccaa ggaacgcatg
301 atcatcatca tcatcgagat cattgagaag acagagatca tccgccagca gggtctggcc
361 tcctacgact acgtgcgccg ccgcctcacg gctgaggacc tgttcgaggc tcggatcatc
421 tctctcgaga cctacaacct gctccgggag ggcaccagga gcctccgtga ggctctcgag
481 gcggagtccg cctggtgcta cctctatggc acgggctccg tggctggtgt ctacctgccc
541 ggttccaggc agacactgag catctaccag gctctcaaga aagggctgct gagtgccgag
601 gtggcccgcc tgctgctgga ggcacaggca gccacaggct tcctgctgga cccggtgaag
661 ggggagcggc tgactgtgga tgaggctgtg cggaagggcc tcgtggggcc cgagctgcac
721 gaccgcctgc tctcggctga gcgggcggtc accggctacc gtgaccccta caccgagcag
781 accatctcgc tcttccaggc catgaagaag gagctgatcc ctactgagga ggccctgcgg
841 ctgctggatg cccagctggc caccggcggc atcgtggacc cccgcctggg cttccacctt
901 cccctggagg tggcttacca gcgtggctac ctcaacaagg acacgcacga ccagctgtca
961 gagcccagcg aggtgcgcag ctacgtggac ccgtccaccg acgagcgcct cagctacacg
1021 cagctgctca ggcggtgccg tcgtgacgac ggcaccggcc agctgctcct gccactgtcg
1081 gacgcccgca agctgacctt ccgtggcctg cggaagcaga tcaccatgga ggagctggtg
1141 cgctcgcagg tcatggacga ggccacggcg ctgcagctgc gggagggcct gacctccatc
1201 gaggaggtca ccaagaactt gcagaagttc ctggaaggca ccagctgcat cgctggtgtc
1261 ttcgtggacg ccaccaagga acggctctcg gtgtaccagg ccatgaagaa gggcatcatc
1321 cgccccggca cagcctttga gctcctggag gcgcaggcgg ccaccggtta cgtcatcgac
1381 cccatcaagg gactgaagct gacggtggag gaggctgtgc gtatgggcat tgtgggcccc
1441 gagttcaagg acaagctgct gtcggccgag cgcgccgtca ctgggtacaa ggacccctac
1501 tctgggaagc tcatctccct cttccaggcc atgaagaagg gcctgatcct gaaggaccat
1561 ggcatccgcc tgctggaggc ccagatcgcc acgggcggca tcatcgaccc tgaggagagc
1621 caccggctgc ccgtggaggt ggcctacaag cgcggcctct tcgatgagga gatgaacgag
1681 atcctgaccg acccctcgga cgacaccaag ggcttctttg accctaacac ggaggagaac
1741 ctcacctacc tgcagctgat ggagcgttgt atcactgacc cccagacggg cctgtgtctc
1801 ttgccgctga aggagaagaa gcgggagcgg aagacgtcct ccaagtcctc cgtgcgcaag
1861 cgccgagtgg tcatcgtgga ccccgagacg ggcaaggaga tgtcagtgta cgaggcctac
1921 cgcaagggcc tgattgacca ccagacgtac ctggagctgt ccgagcagga gtgcgagtgg
1981 gaggagatca ccatctcctc ctcggacggc gtggtcaagt ccatgatcat cgaccgccgc
2041 tccgggcgcc agtacgacat cgatgatgcc atcgccaaga acctcatcga ccgctcggca
2101 ctggaccagt accgcgccgg cacgctctcc atcaccgagt tcgccgacat gctctcgggc
2161 aacgccggtg gtttccgctc ccgttcctcc tcggtgggat cctcctcctc ctaccccatc
2221 agccccgccg tctccaggac ccagctggcc tcctggtcag accccactga ggagacgggc
2281 cccgtggctg gcatcctgga cacggagacg ctggagaagg tgtccatcac cgaggccatg
2341 caccggaacc tggtggataa catcacgggg cagcggctgc tggaggcgca ggcctgcacc
2401 gggggcatca tcgaccccag caccggtgag cgcttccctg tcaccgacgc cgtcaacaag
2461 ggcctggtgg acaagatcat ggtggaccgc atcaacctgg cccagaaggc cttctgcggc
2521 ttcgaggacc cacgcaccaa gaccaagatg tcggccgccc aggccctgaa gaagggctgg
2581 ctctactacg aggccggcca gcgcttcctg gaggtgcagt acctgaccgg cggcttgatc
2641 gagcccgaca cgccgggccg cgtgcccctg gacgaggccc tgcagcgcgg cacggtggac
2701 gcccgcaccg cacagaagct gcgtgacgtg ggcgcctact ccaagtacct cacctgccct
2761 aagaccaagc tcaagatctc ctataaggac gcgctggacc gcagcatggt ggaggagggc
2821 acggggctgc ggctgctgga ggctgccgcg cagtccacca agggctacta cagcccctac
2881 agcgtcagcg gctccggctc taccgctggc tcccgcaccg gctcgcgcac cggctcccgg
2941 gccggctccc gccgcggcag ctttgacgcc accggctccg gcttctccat gaccttctct
3001 tcatcctcct actcctcctc gggctacggc cgccgctacg cctcggggtc ctcggcctcc
3061 ctggggggcc ctgagtctgc cgtggcctga ggctgcctgc gcccaccccg ctctgcatgc
3121 ggcccagccc ggctcccacc gaggcgcggg ggccgttttc aacgcttaaa ggtgtcttcc
3181 tcccaagtgg tgcctaaagt ttaaccaaaa agaccagact aatatattaa tatatatctg
3241 ctgtccagac agcctgtatc ttgggggaca gggctggccc agccctgctg gccgcctcac
3301 cccctcgggt ctcctcactc ccttctacct gccactcaca cagccaggtg ccttggaggg
3361 tcccaagctg ggccccagcc caccctcctg tcttcccagg gtagcccgcc tgccagtcct
3421 agctgcacag ggcagctggg cccaaccctg tctgtagagg gccctggtgt ttctagcact
3481 ggcctgcacg gtgggccttg ctggggacgg ggggccccag tcagcctctc tcccagtcta
3541 cccagagaag ccccttcccc atgggaagac gaggccctcg ggcccagccc ccacagtgct
3601 gtctgatctg tgctttccag ctcacccccc acactcactc ctgagacccc tggcctccgg
3661 cgtcagcctc cagcctctgt tcccctagta agtgccttcc atgtcggcct ctaaccccag
3721 gccccgagga cccagaccca gtggggaggc ggacgttcca gccggcatgg ctgggaactg
3781 cagacctgtc ctcctggtgg gtccaggggc ccctccagct tgtggagccc cacactgggg
3841 tgccgcctgc ccgtctctct cccatggagc cccagccccc tttgggccca gggacaccag
3901 ccaggctctg tgctgaccct cctgttgcac ccagccctgg tctcagcagc gaccacccct
3961 gcctccaccc tctgagcttt gcatgttcca ctaaccccgg gcgggtggca ggtggaggtg
4021 tcaggctgct ggcgcctctg caagggcaga acactaacct gaccgtgggc ggggccttgc
4081 ggtatccgcc cccaataaaa gcaattccaa ccttaaaaaa aaaaaaaaaa aaa
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