LOCUS BC007581 3130 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 4 family, member A1, mRNA (cDNA
clone MGC:15564 IMAGE:3139944), complete cds.
ACCESSION BC007581
VERSION BC007581.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3130)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3130)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: h Column: 15.
FEATURES Location/Qualifiers
source 1..3130
/db_xref="H-InvDB:HIT000033313"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15564 IMAGE:3139944"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3130
/gene="ALDH4A1"
/gene_synonym="P5CD"
/gene_synonym="P5CDh"
/gene_synonym="P5CDhL"
/gene_synonym="P5CDhS"
/db_xref="GeneID:8659"
/db_xref="HGNC:HGNC:406"
/db_xref="MIM:606811"
CDS 7..1698
/gene="ALDH4A1"
/gene_synonym="P5CD"
/gene_synonym="P5CDh"
/gene_synonym="P5CDhL"
/gene_synonym="P5CDhS"
/codon_start=1
/product="aldehyde dehydrogenase 4 family, member A1"
/protein_id="AAH07581.1"
/db_xref="GeneID:8659"
/db_xref="HGNC:HGNC:406"
/db_xref="MIM:606811"
/translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGS
PERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSPFNHGHKVAKFCYADKSLL
NKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEI
DAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGN
LAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSS
EHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVS
GTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI
DAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFG
PVLSVYVYPDDKYKETLQLIDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIND
KSTGSIVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWSYAYMQ"
BASE COUNT 589 a 950 c 940 g 651 t
ORIGIN
1 cccgagatgc tgctgccggc gcccgcgctc cgccgcgccc tgctgtcccg cccctggacc
61 ggggccggcc tgcggtggaa gcacacctcc tccctgaagg tggccaacga gcccgtctta
121 gccttcacgc agggcagccc tgagcgagat gccctgcaaa aggccttgaa ggacctgaag
181 ggccggatgg aagccatccc atgcgtggtg ggggatgagg aggtgtggac gtcggacgtg
241 cagtaccaag tgtcgccttt taaccatgga cataaggtgg ccaagttctg ttatgcagac
301 aagagcctgc tcaacaaagc cattgaggct gccctggctg cccggaaaga gtgggacctg
361 aagcctattg cagaccgggc ccagatcttc ctgaaggcgg cagacatgct gagtgggccg
421 cgcagggctg agatcctcgc caagaccatg gtgggacagg gtaagaccgt gatccaagcg
481 gagattgacg ctgcagcgga actcatcgac ttcttccggt tcaatgccaa gtatgcggtg
541 gagctggagg ggcagcagcc catcagcgtg cccccgagca ccaacagcac ggtgtaccgg
601 ggtctggagg gcttcgtggc ggccatctcg ccctttaact tcactgcaat cggcggcaac
661 ctggcggggg caccggccct gatgggcaac gtggtcctat ggaagcccag tgacactgcc
721 atgctggcca gctatgctgt ctaccgcatc cttcgggagg ctggcctgcc ccccaacatc
781 atccagtttg tgccagctga tgggccccta tttggggaca ctgtcaccag ctcagagcac
841 ctctgtggca tcaacttcac aggcagtgtg cccaccttca aacacctgtg gaagcaggtg
901 gcccagaacc tggaccggtt ccacaccttc ccacgcctgg ctggagagtg cggcggaaag
961 aacttccact tcgtgcaccg ctcggccgac gtggagagcg tggtgagcgg gaccctccgc
1021 tcagccttcg agtacggtgg ccagaagtgt tccgcctgct cgcgtctcta cgtgccgcac
1081 tcgctgtggc cgcagatcaa agggcggctg ctggaggagc acagtcggat caaagtgggc
1141 gaccctgcag aggattttgg gaccttcttc tctgcagtga ttgatgccaa gtcctttgcc
1201 cgtatcaaga agtggctgga gcacgcacgc tcctcaccca gcctcaccat cctggccggg
1261 ggcaagtgtg atgactccgt gggctacttt gtggagccct gcatcgtgga gagcaaggac
1321 cctcaggagc ccatcatgaa ggaggagatc ttcgggcctg tactgtctgt gtacgtctac
1381 ccggatgaca agtacaagga gacgctgcag ctgattgaca gcaccaccag ctatggcctc
1441 acgggggcag tgttctccca ggataaggac gtcgtgcagg aggccacaaa ggtgctgagg
1501 aatgctgccg gcaacttcta catcaacgac aagtccactg gctcgatagt gggccagcag
1561 ccctttgggg gggcccgagc ctctggaacc aatgacaagc cagggggccc acactacatc
1621 ctgcgctgga cgtcgccgca ggtcatcaag gagacacata agcccctggg ggactggagc
1681 tacgcgtaca tgcagtgagc ccctctcggg ctccaccgtc cagctgtctg tccgtccagg
1741 tggccgacct cactgcacag accccactcc agcccctcca ccccttcttc atgcacagct
1801 gcctttctat aatccgggct tgactccctt cttaccactg tattctggcc tctcccatgc
1861 ctcaggctct ggtttgagat cgtgctgggg aggaacatgg ccactacccc ttatcccatc
1921 ggccatgtgg gaggtatgac cctggtgcct ggcaggttct ccctctgccc tccactgggc
1981 ccagtggctc agggacctgg ggaaaggaga tggagcagct cttgggatcc tttggggaaa
2041 aggaggccat tctgggcccc ttggcaaacc tcaccactca cagaggctcc tggccttgat
2101 ccctgcccct ccaggtgtcc agggtaaagt gtaactcaga ctgacctgtg gggcacaggg
2161 ggcaccagct ggccttgccc tctctggtct gggctgtcta ccttcctcac tgtatctttg
2221 cccagaccca cctgggccag taggcccctg tccccagcca cacaccttag atgctggcat
2281 gccttactcc aggtgcctgt gtttggccga ggcctgtgtg attcccggtc tgcaccacat
2341 ggcggggttg gggggccgct ggaggccacc tgccaaggcg tgggatggga tggtcctgcc
2401 ggtttaggcc gtgattctgg aaaaccttgg atgggccttc gtcctatgtc agccttccct
2461 ttgatcctca ggccctacct gtagagacct ccactcctag agccagtctc agggtctggg
2521 atttccctgc aggagctcag ccaccactgt gccatggtga cacaggccaa ggcagacatt
2581 ggccctccct tctcccagcc cccagaggcc tggccttggg ttcgtcagca tgggccgagg
2641 acgttgcctg tagaatcctc ctctgcctgg gagtggctct gtgtggacca gtccctcact
2701 ggcccattct ttttttgacg cagccaatct gtgaccacga ttcctcccac agatgcctcc
2761 tgcttggatt ctgagtggtc agagatctgt aaagcatgac tttcaaggat ggttcttagg
2821 ggactgtgaa agtgttgggt cttcctccag gatgcctgca tgggacccca cccggagctg
2881 gtgtggccat tccccaagtg ccactggccc atggatgggg gtgggtgctg gtgccagctg
2941 ggctgggtgt gggttctgtg tccttccagg atatgtgtca tttcccatga ggggccgggg
3001 caggtggctg ggtgggggca caggctggag tattcttagt tctactggtt ctacactgtg
3061 aggtggcaat gggatttgct cagatgccac ccaataaaat gcctgttact taaaaaaaaa
3121 aaaaaaaaaa
//