LOCUS BC007578 1977 bp mRNA linear HUM 19-OCT-2006 DEFINITION Homo sapiens peroxisome proliferator-activated receptor delta, mRNA (cDNA clone MGC:15560 IMAGE:3139849), complete cds. ACCESSION BC007578 VERSION BC007578.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1977) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1977) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: h Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29171748. FEATURES Location/Qualifiers source 1..1977 /db_xref="H-InvDB:HIT000033310" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15560 IMAGE:3139849" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1977 /gene="PPARD" /gene_synonym="FAAR" /gene_synonym="MGC3931" /gene_synonym="NR1C2" /gene_synonym="NUC1" /gene_synonym="NUCI" /gene_synonym="NUCII" /gene_synonym="PPAR-beta" /gene_synonym="PPARB" /db_xref="GeneID:5467" /db_xref="HGNC:HGNC:9235" /db_xref="MIM:600409" CDS 259..1344 /gene="PPARD" /gene_synonym="FAAR" /gene_synonym="MGC3931" /gene_synonym="NR1C2" /gene_synonym="NUC1" /gene_synonym="NUCI" /gene_synonym="NUCII" /gene_synonym="PPAR-beta" /gene_synonym="PPARB" /codon_start=1 /product="PPARD protein" /protein_id="AAH07578.1" /db_xref="GeneID:5467" /db_xref="HGNC:HGNC:9235" /db_xref="MIM:600409" /translation="MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTD LSRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTI RMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGL TANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIET LWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLN DQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF AVKFNALELDDSDLALFIAAIILCGGE" BASE COUNT 504 a 510 c 582 g 381 t ORIGIN 1 gttttggcag gagcgggaga attctgcgga gcctgcggga cggcggcggt ggcgccgtag 61 gcagccggga cagtgttgta cagtgttttg ggcatgcacg tgatactcac acagtggctt 121 ctgctcacca acagatgaag acagatgcac caacgaggct gatgggaacc atcctgtaga 181 ggtccatctg cgttcagacc cagacgatgc cagagctatg actgggcctg caggtgtggc 241 gccgagggga gatcagccat ggagcagcca caggaggaag cccctgaggt ccgggaagag 301 gaggagaaag aggaagtggc agaggcagaa ggagccccag agctcaatgg gggaccacag 361 catgcacttc cttccagcag ctacacagac ctctcccgga gctcctcgcc accctcactg 421 ctggaccaac tgcagatggg ctgtgacggg gcctcatgcg gcagcctcaa catggagtgc 481 cgggtgtgcg gggacaaggc atcgggcttc cactacggtg ttcatgcatg tgaggggtgc 541 aagggcttct tccgtcgtac gatccgcatg aagctggagt acgagaagtg tgagcgcagc 601 tgcaagattc agaagaagaa ccgcaacaag tgccagtact gccgcttcca gaagtgcctg 661 gcactgggca tgtcacacaa cgctatccgt tttggtcgga tgccggaggc tgagaagagg 721 aagctggtgg cagggctgac tgcaaatgag gggagccagt acaacccaca ggtggccgac 781 ctgaaggcct tctccaagca catctacaat gcctacctga aaaacttcaa catgaccaaa 841 aagaaggccc gcagcatcct caccggcaaa gccagccaca cggcgccctt tgtgatccac 901 gacatcgaga cattgtggca ggcagagaag gggctggtgt ggaagcagtt ggtgaatggc 961 ctgcctccct acaaggagat cagcgtgcac gtcttctacc gctgccagtg caccacagtg 1021 gagaccgtgc gggagctcac tgagttcgcc aagagcatcc ccagcttcag cagcctcttc 1081 ctcaacgacc aggttaccct tctcaagtat ggcgtgcacg aggccatctt cgccatgctg 1141 gcctctatcg tcaacaagga cgggctgctg gtagccaacg gcagtggctt tgtcacccgt 1201 gagttcctgc gcagcctccg caaacccttc agtgatatca ttgagcctaa gtttgaattt 1261 gctgtcaagt tcaacgccct ggaacttgat gacagtgacc tggccctatt cattgcggcc 1321 atcattctgt gtggaggtga gtgagagtgg ggcaggtggg ctggcctggc acacccagtc 1381 gtcctggggg ttggccctca ctgcagggca ctgtgcctga gctctgacag tgtggggaag 1441 tgtccctgtg atcttggcag tggaacatgc aaggcactga ctgagcatgc aggatcagct 1501 ccatctcatt atgtacgtag atagaggtgg agacaggaaa aagactaagc cagacgtggt 1561 ggctcacacc tgtaatccca gcactttggc aggccgaggc gggtggatca cttgaggtca 1621 ggagttcgaa accagcctgg ccaacatggt gaaaccccgt ctctactaaa aatacaaaaa 1681 attagccaga tgtggtggca cgcgcctgta atcccagcta cttgggaggc tgagccagga 1741 gaatcgcttg aacccgaaag gtggaggttg cagtgagcca aaatcccacc actgcactcc 1801 agcctgggtg acagagtgag accctgtctc aaaaaaaagg aaaaggacta acaggcagta 1861 tgctgtcatg ttaatgtggg gtggaaaaat tgtctgcatt ttttctgcat ttttaaaatt 1921 ccaacccaat aaatacaata ataactatgc taaaaaaaaa aaaaaaaaaa aaaaaaa //