LOCUS BC007532 887 bp mRNA linear HTC 09-DEC-2005 DEFINITION Homo sapiens staufen, RNA binding protein, homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:2960593), with apparent retained intron. ACCESSION BC007532 VERSION BC007532.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 887) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 887) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: b Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759175 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..887 /db_xref="H-InvDB:HIT000086833" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2960593" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 242 a 245 c 205 g 195 t ORIGIN 1 ccggcggctg ccgcgtctct ctcggctccc gcttcctttg accgcctccc cccccggccc 61 ggcggcgccc gcctcctcca cggccactcc gcctcttccc tcccttcgtc ccttcttcct 121 ctcccttttt tccttcttcc ttcccctcct cgccgccacc gcccaggacc gccggccggg 181 ggacgagctc ggagcagcag ccagagttta ttaaccactt aacctctcag aactgaacaa 241 agacaacatt gttcctggaa cgccctcttt ttaaaaaaga aagcataacc cctactgtag 301 aactaaatgc actgtgcatg aaacttggaa aaaaaccaat gtataagcct gttgaccctt 361 actctcggat gcagtccacc tataactaca acatgagagg aggtgcttat cccccgaggt 421 acttttaccc atttccagtt ccacctttac tttatcaagt ggaactttct gtgggaggac 481 agcaatttaa tggcaaagga aagacaagac aggctgcgaa acacgatgct gctgccaaag 541 cgttgaggat cctgcagaat gagcccctgc cagagaggct ggaggtgaat ggaagagaat 601 ccgaagaaga aaatctcaat aaatctgaaa taagtcaagt gtttgagatt gcacttaaac 661 ggaacttgcc tgtgaatttc gaggtggccc gggagagtgg cccaccccac atgaagaact 721 ttgtgaccaa ggtttcggtt ggggagtttg tgggggaagg tgaagggaaa agcaagaaga 781 tttcaaagaa aaatgccgcc atagctgttc ttgaggagct gaagaagtta ccgcccctgc 841 ctgcagttga acgagtaaag cctagaatca aaaaaaaaaa aaaaaaa //