LOCUS BC007508 1952 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ataxin 10, mRNA (cDNA clone MGC:4152 IMAGE:3030062), complete cds. ACCESSION BC007508 VERSION BC007508.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1952) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1952) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC007508.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: n Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51093837. FEATURES Location/Qualifiers source 1..1952 /db_xref="H-InvDB:HIT000033262" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4152 IMAGE:3030062" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1952 /gene="ATXN10" /gene_synonym="E46L" /gene_synonym="FLJ37990" /db_xref="GeneID:25814" /db_xref="HGNC:HGNC:10549" /db_xref="MIM:603516" CDS 189..1616 /gene="ATXN10" /gene_synonym="E46L" /gene_synonym="FLJ37990" /codon_start=1 /product="ataxin 10" /protein_id="AAH07508.1" /db_xref="GeneID:25814" /db_xref="HGNC:HGNC:10549" /db_xref="MIM:603516" /translation="MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPR TIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRNACIECSVNQNSI RNLDTIGVAVDLILLFRELRVEQESLLTAFRCGLQFLGNIASRNEDSQSIVWVHAFPE LFLSCLNHPDKKIVAYSSMILFTSLNHERMKELEENLNIAIDVIDAYQKHPESEWPFL IITDLFLKSPELVQAMFPKLNNQERVTLLDLMIAKITSDEPLTKDDIPVFLRHAELIA STFVDQCKTVLKLASEEPPDDEEALATIRLLDVLCEMTVNTELLGYLQVFPGLLERVI DLLRVIHVAGKETTNIFSNCGCVRAEGDISNVANGFKSHLIRLIGNLCYKNKDNQDKV NELDGIPLILDNCNISDSNPFLTQWVIYAIRNLTEDNSQNQDLIAKMEEQGLADASLL KKVGFEVEKKGEKLILKSTRDTPKP" BASE COUNT 526 a 445 c 457 g 524 t ORIGIN 1 agagctctcc ggcggcggcg cagcttcagg gcagcgcggg ctgcagcggc ggcggcggtt 61 agggctgtgt agggcgaggc ctcccccttc ctcctcgcca tcctactcct ccctcctcgt 121 catcctcccc cttcgtcctc ctcgccttcc tcctcctcgt caggctcgac ccagctgtga 181 gcggcaagat ggcggcgccc aggccgccgc ctgccaggct gtcgggcgtc atggtgccgg 241 cgcccatcca agacctggag gccctgcgcg cgctcacggc gctcttcaaa gagcagcgga 301 accgagaaac agcacccagg actatcttcc aaagagttct ggatatccta aagaaatctt 361 ctcatgctgt tgagcttgcc tgcagagatc catcccaagt ggaaaacctg gcttccagtc 421 tgcagttaat aacagaatgc ttcaggtgtc ttcgcaatgc ttgcatagag tgttctgtga 481 accagaattc aatcaggaac ttggatacga ttggtgttgc tgttgatttg attcttctgt 541 ttcgtgaact gcgagtggaa caggaatctc tgttgacagc ttttcgctgt ggcctgcagt 601 ttttaggcaa cattgcctca cggaatgaag attcccagtc tattgtttgg gtgcatgctt 661 tcccagaact gtttttgtct tgcttaaatc atccggacaa aaaaattgtt gcctactctt 721 caatgatttt gtttacatcc cttaatcatg aaagaatgaa agaactggag gagaacctca 781 atattgcaat tgatgtcata gatgcttacc aaaaacatcc tgaatcagaa tggccgttct 841 tgattattac agacctcttt ctgaaaagcc cggaattggt acaagccatg tttcccaaac 901 tgaacaatca agaaagagtt acactgttag accttatgat agccaagata acgagtgatg 961 agccactcac caaggatgac atccctgtgt ttttgcggca tgctgagttg attgcaagca 1021 cctttgtgga tcagtgcaag actgtgctca agctggcctc tgaggagcct cctgatgatg 1081 aggaggcact ggctacaatt aggcttctcg acgtcctgtg cgaaatgact gtgaatactg 1141 agctgctcgg ctatctgcag gttttccctg gcttgctgga aagagtgatt gatcttttgc 1201 gggtgattca tgtagctgga aaagaaacca caaacatctt cagtaattgt ggttgcgtga 1261 gagcagaagg tgacatctcc aatgtggcca atgggtttaa gtctcatctc attcgtctga 1321 ttggaaatct gtgttacaag aataaagata accaagacaa ggtaaatgag ctggatggta 1381 tcccgttgat cctggacaac tgcaacatca gtgacagtaa cccctttctg acccagtggg 1441 tgatatatgc catccgaaac cttaccgaag acaacagcca aaaccaagat ttgattgcaa 1501 agatggagga acaggggctg gcagatgcat ccctacttaa aaaagtgggt tttgaagttg 1561 aaaagaaagg cgaaaagctg atcctgaaat ctactagaga cacccctaag ccatgaatga 1621 actacatcca aatacctgaa tttttggaat ctgtttcatg gatttttcat cttctaccgt 1681 atgtgaaatt gcaagtgttt gaagatttat aagtacaaat ttgggaacat acaaatcttt 1741 taggtagtag agtttaacgt gtataagcta aaagtgaaag taactgagtg ttctcttgtt 1801 tctttgcatt aatgtaactg tgtggtttgc ctttgtcccc ctggatagaa cgtgcattta 1861 aagaatatat tgtacttact gtgacagcag ataataaacc agtctcttgg agggcacaac 1921 ccttatttga caaaaaaaaa aaaaaaaaaa aa //