LOCUS BC007495 920 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens centromere protein M, mRNA (cDNA clone MGC:3401
IMAGE:2966541), complete cds.
ACCESSION BC007495
VERSION BC007495.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 920)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 920)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC007495.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50845413.
FEATURES Location/Qualifiers
source 1..920
/db_xref="H-InvDB:HIT000033249"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3401 IMAGE:2966541"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..920
/gene="CENPM"
/gene_synonym="bK250D10.2"
/gene_synonym="CENP-M"
/gene_synonym="MGC861"
/gene_synonym="PANE1"
/db_xref="GeneID:79019"
/db_xref="HGNC:HGNC:18352"
/db_xref="MIM:610152"
CDS 49..591
/gene="CENPM"
/gene_synonym="bK250D10.2"
/gene_synonym="CENP-M"
/gene_synonym="MGC861"
/gene_synonym="PANE1"
/codon_start=1
/product="centromere protein M"
/protein_id="AAH07495.1"
/db_xref="GeneID:79019"
/db_xref="HGNC:HGNC:18352"
/db_xref="MIM:610152"
/translation="MSVLRPLDKLPGLNTATILLVGTEDALLQQLADSMLKEDCASEL
KVHLAKSLPLPSSVNRPRIDLIVFVVNLHSKYSLQNTEESLRHVDASFFLGKVCFLAT
GAGRESHCSIHRHTVVKLAHTYQSPLLYCDLEVEGFRATMAQRLVRVLQICAGHVPGV
SALNLLSLLRSSEGPSLEDL"
BASE COUNT 187 a 268 c 272 g 193 t
ORIGIN
1 gaaagatcgg cgcgcaccgc aggagcaacg gttggtcctg cggctgtgat gtcggtgttg
61 aggcccctgg acaagctgcc cggcctgaac acggccacca tcttgctggt gggcacggag
121 gatgctcttc tgcagcagct ggcggactcg atgctcaaag aggactgcgc ctccgagctg
181 aaggtccact tggcaaagtc cctccctttg ccctccagtg tgaatcggcc ccgaattgac
241 ctgatcgtgt ttgtggttaa tcttcacagc aaatacagtc tccagaacac agaggagtcc
301 ctgcgccatg tggatgccag cttcttcttg gggaaggtgt gtttcctcgc cacaggtgct
361 gggcgggaga gccactgcag cattcaccgg cacaccgtgg tgaagctggc ccacacctat
421 caaagccccc tgctctactg tgacctggag gtggaaggct ttagggccac catggcgcag
481 cgcctggtgc gcgtgctgca gatctgtgct ggccacgtgc ccggtgtctc agctctgaac
541 ctgctgtccc tgctgagaag ctctgagggc ccctccctgg aggacctgtg agggtggctg
601 gcccctgggc tgccccttct catggcttcg tgctgactcc ataaacattc tctgttgagg
661 atgtccagtc agggcttgac aggcccaggc tcagcccgcc gtggctggga aggttccctg
721 cagtgccagt gctgcagcag ggagagctgg gcagaagcag cgagggggcc cagctggcga
781 gactgtagcc ccctcccact cccacactca ctcttgcaga gcctgtgtct ttaagcagct
841 ggcgtgttac atctccattt aaggtttcct ttgaacaaaa ggtctgtggc taaaaaaaaa
901 aaaaaaaaaa aaaaaaaaaa
//