LOCUS BC007457 1417 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 5, mRNA (cDNA clone
MGC:12181 IMAGE:4044464), complete cds.
ACCESSION BC007457
VERSION BC007457.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1417)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1417)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127557.
FEATURES Location/Qualifiers
source 1..1417
/db_xref="H-InvDB:HIT000033238"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12181 IMAGE:4044464"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1417
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
CDS 63..722
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/codon_start=1
/product="chromatin modifying protein 5"
/protein_id="AAH07457.1"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
/translation="MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVK
YKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT
KTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTPELDE
DDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIPA
S"
BASE COUNT 458 a 226 c 299 g 434 t
ORIGIN
1 agtgactctg cttccgtttc tggttttgct ctagtgtttg ggtttcttcg cggctgctca
61 agatgaaccg actcttcggg aaagcgaaac ccaaggctcc gccgcccagc ctgactgact
121 gcattggcac ggtggacagt agagcagaat ccattgacaa gaagatttct cgattggatg
181 ctgagctagt gaagtataag gatcagatca agaagatgag agagggtcct gcaaagaata
241 tggtcaagca gaaagccttg cgagttttaa agcaaaagag gatgtatgag cagcagcggg
301 acaatcttgc ccaacagtca ttcaacatgg aacaagccaa ttataccatc cagtctttga
361 aggacaccaa gaccacggtt gatgctatga aactgggagt aaaggaaatg aagaaggcat
421 acaagcaagt gaagatcgac cagattgagg atttacaaga ccagctagag gatatgatgg
481 aagatgcaaa tgaaatccaa gaagcactga gtcgcagtta tggcacccca gaactggatg
541 aagatgattt agaagcagag ttggatgcac taggtgatga gcttctggct gatgaagaca
601 gttcttattt ggatgaggca gcatctgcac ctgcaattcc agaaggtgtt cccactgata
661 caaaaaacaa ggatggagtt ctggtggatg aatttggatt gccacagatc cctgcttcat
721 agatttgcat cattcaagca tatcttgtaa aacaaacaca tattatggga ctaggaaata
781 tttatctttc caaatttgcc ataacagatt taggtttctt tcctttcttt gaaggaaagt
841 ttaattacat tgctctttta ttttttccat taagagactc attgcttggg aaatgctttc
901 ttcgtactaa aatttgattc ctttttttct tatgaaaaac gaactcagtt taaaagtatt
961 tttagctcgt atgacttgtt ttcattcatt aataataatt tgaaataaaa ctaaggaaat
1021 ggaatcttaa aagtctatga cagtgtaact ctacagtctc aaaatgacct gataaattga
1081 taagacaaag atgagattat tggggctgtt catattatga ttcagaatca ttttctattg
1141 tggtattata ggttggttaa agtgatggcc tttttgatgg gttttgttgt gtcttgtgaa
1201 caagtcgtta ctgtgtccat tattggaatg gaattatcac tactgtatca tgagtgggta
1261 ttttgattct atggttccct cagtattaca tcttgacttg taatcaatta tgaatatttc
1321 ttgatattta atgtatagga catttattta tactcaataa atatttttca aaaggatata
1381 attttagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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