LOCUS BC007445 1918 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COX4 neighbor, mRNA (cDNA clone MGC:4522
IMAGE:3009805), complete cds.
ACCESSION BC007445
VERSION BC007445.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1918)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1918)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147520.
FEATURES Location/Qualifiers
source 1..1918
/db_xref="H-InvDB:HIT000033228"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4522 IMAGE:3009805"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1918
/gene="COX4NB"
/db_xref="GeneID:10328"
/db_xref="HGNC:HGNC:7864"
/db_xref="MIM:604886"
CDS 191..823
/gene="COX4NB"
/codon_start=1
/product="COX4 neighbor"
/protein_id="AAH07445.1"
/db_xref="GeneID:10328"
/db_xref="HGNC:HGNC:7864"
/db_xref="MIM:604886"
/translation="MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPL
GGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDA
SPNQVAEKVASRIAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDY
CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAVLHLC"
BASE COUNT 470 a 486 c 496 g 466 t
ORIGIN
1 ggcacgaggc gcttttccag gagccgaggc ccaaacgggg ccgggcctga agggtccccc
61 gccagcccgc ggccgcgcca tcaatcgccg ccgcctcgtc ccgcttctcg gctgaggcgc
121 cgcgcggcca ggcagcgggt ccaggcctca gccgcgcgcc caggggcctc cggggccctc
181 ccgggtcagc atgcccgggg tgaaactgac cacccaggcc tactgcaaga tggtgctgca
241 cggcgccaag tacccgcact gcgccgtcaa cgggctcctg gtggccgaga agcagaagcc
301 gcgtaaggag cacctccccc tgggcggccc cggcgcccac cacaccctct tcgtggactg
361 catccccctc ttccacggca ccctggccct cgcccccatg ctggaggtgg ctctcaccct
421 gattgattca tggtgcaaag atcatagcta cgtgattgct ggttattatc aagctaatga
481 gcgagtaaag gatgccagtc caaaccaggt tgcagagaag gtggcctcca gaatcgccga
541 gggcttcagc gacactgcgc tcatcatggt agacaacacc aagtttacga tggactgcgt
601 agcgcctacg atccacgtgt acgagcacca tgagaacaga tggcggtgca gagacccaca
661 ccatgactac tgtgaagact ggccagaggc acagaggatc tcagcctcgc tcctggacag
721 ccggtcctac gagacgctcg tggatttcga taaccacctg gatgacattc ggaatgactg
781 gacaaaccca gagatcaata aagctgtcct acacttgtgc taggcaggca ccgctgtgac
841 tgggctccgg gcctttccac tacgttgaag aagaaaacct atttttaaat gtaaataaaa
901 tatctggtag cctgtgtgga aagctgaccg ttttaagaag tggcatgtgc cttgaaaggg
961 ggcagaatgt tcagtcggtc gtgtttttaa cacagagtct ctagaagagg tgcagacatc
1021 ccgtctgact gtccctgtgg actctctcag ttgtatgttg ctataatcct ccaaatcaaa
1081 gctctttctg cttgtgcaag attgttccta ttaaacagtt ttaactaacc ttttataatc
1141 tggagagaat actttttaag gcttttgaac tatctttttt taaaaaaaaa aaaaagccca
1201 catcttatac tccaatgagt gtgtttgtga gtttttatcc tgtttgaatt ttgatgtcgt
1261 ccaggcgtcc tgggatcagg gtagacacgt ggagtgctgg tgctgagctg tttgagaagc
1321 tctgtgtggg tgtttctgtg gtcaggtagg ctgggctgtg aacagcactg ctccacatgg
1381 tgtcggctca cagagccacc gcaactctgc ccagcgggag tgacaccact gatgccacag
1441 aagcctttat cgttaggggc aaaagcagac atctctggta gcaggagctc agtgtggtgc
1501 tcttcagcca cgcagaaagc tcacgtgcct gcagggccag gaaagggaaa tgatcgtttc
1561 ttttgtatta ggaaaaacaa gacttagact tcccgagttg tgcagagtga cgtctgtact
1621 ttttatactt agaacatttg gtcaagtttt gtaaccaaac cttagggaat tgagagggaa
1681 actttatggt acgtttacct tttttccttt ttatatgaat tattttgtac aaagttcaga
1741 gagcggtacc tttcctactg tcttttcttt gactccatgg aggaatttgt aacgatcggt
1801 gtgacctgaa agggtttgtg atacagcggt cactattttc tcttaacaca taggaaaaaa
1861 gttcagacat cgctacaata aatgtgcttt atttgaaaaa aaaaaaaaaa aaaaaaaa
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