LOCUS BC007443 2211 bp mRNA linear HUM 12-NOV-2003
DEFINITION Homo sapiens FK506 binding protein 9, 63 kDa, mRNA (cDNA clone
IMAGE:2963618), partial cds.
ACCESSION BC007443
VERSION BC007443.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2211)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC007443.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307926.
FEATURES Location/Qualifiers
source 1..2211
/db_xref="H-InvDB:HIT000086824"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2963618"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2211
/gene="FKBP9"
/gene_synonym="FKBP60"
/gene_synonym="FKBP63"
/gene_synonym="PPIase"
/db_xref="GeneID:11328"
CDS <1..599
/gene="FKBP9"
/gene_synonym="FKBP60"
/gene_synonym="FKBP63"
/gene_synonym="PPIase"
/codon_start=3
/product="FKBP9 protein"
/protein_id="AAH07443.2"
/db_xref="GeneID:11328"
/translation="ITSHYKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTY
NIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELL
ELVAGLPEGYMFIWNGEVSPNLFEEIDKDGNGEVLLEEFSEYIHAQVASGKGKLAPGF
DAELIVKNMFTNQDRNGDGKVTAEEFKLKDQEAKHDEL"
misc_feature 24..308
/gene="FKBP9"
/gene_synonym="FKBP60"
/gene_synonym="FKBP63"
/gene_synonym="PPIase"
/note="FKBP; Region: FKBP-type peptidyl-prolyl cis-trans
isomerase"
/db_xref="CDD:pfam00254"
misc_feature 375..560
/gene="FKBP9"
/gene_synonym="FKBP60"
/gene_synonym="FKBP63"
/gene_synonym="PPIase"
/note="EFh; Region: EF-hand, calcium binding motif"
/db_xref="CDD:cd00051"
BASE COUNT 577 a 503 c 543 g 588 t
ORIGIN
1 gcatcacctc ccactacaaa ccccctgact gctcagtgct gagtaagaag ggagattacc
61 tcaaatatca ctacaatgcc tcacttctgg atgggaccct gctggactcc acgtggaatt
121 taggcaaaac ttacaatatt gttctgggat ctgggcaagt tgtgttgggg atggacatgg
181 gtctcagaga gatgtgcgtt ggcgagaaac ggacagtgat cattccgcct cacctgggct
241 atggggaagc tggcgtggat ggagaagtgc ccggcagtgc cgtattagtg tttgacattg
301 agctgctgga gctggtggct ggccttcctg aggggtacat gttcatatgg aatggtgagg
361 tgtcacccaa cctctttgaa gaaattgaca aggatggcaa cggagaagtc ctcctggaag
421 agttctcaga gtacattcac gcccaggtgg catctggcaa agggaaactc gctcctggct
481 ttgatgctga gctgattgtg aagaatatgt tcaccaacca ggaccggaat ggagatggga
541 aggtcacagc cgaggaattt aaactcaaag accaggaagc caaacacgat gaactctaaa
601 cctggcatga accagatggt gccagggagt acgtgacacc aagccacctg tgtggcaaga
661 cgtgcagtga gggtgcaagg gtctctcaga agttgcatca ttagccagta gtaggtgggt
721 cacatagtac ctggtgtaca catcggggtg ggttgatata tggggtgaga agtttgggct
781 gatcgccagt gatagtaaac aaaatctgtg cagagggcct tagcatggga tgtgtccagt
841 attgaaaagg ctgcactgcc aaccatgatt tgtgagcctt ctgggaaatt ttgttattaa
901 aggaatatat agtgtcagac agaagttata atcatcttgg aggaaccata agaaaaggtg
961 tccagggtat ctatataaag agggttaaat ttttttttaa cttgctggtt aaaacatttt
1021 agaaatattc ttgagatggg caggagagtc aaagggcttg cttgccccag cagagttccc
1081 agcagacagc catggctctt cccagcagcc tgtgcaaatt ctgatgatgg ccccaccccc
1141 gcacacgcac acgcacatca tgcttttcca gctcatcaca ccccgcccca ctatgggcct
1201 accattaata gtgtataact tggaggttaa aagagccttt tggacagaaa actgggccag
1261 gaaaaggcat ctcagaccac aaatagagaa tttgattcct catttgccac ataagtcatc
1321 tgcttagctt ttcctttcct tttttttttt tttttttttt tctggaggca gagtctccct
1381 ttgtcgccag gctggagtgc agtggtgcca tctcggctca ctgcagcact gtctcggctc
1441 actgcagcct ccgcctcccg tattcaagcg attctcctgt ctcagcctcc tgagtagctg
1501 ggactacagg tgtgcaccac cacgcccggc taatttttgt atttttagta gagacggggt
1561 ttcactgtgt tggccaggat ggtctcaatc tcgacctcgt gatccgccca ccttggcctc
1621 ccaaagtgtt gggattacag gcgtgactca ccatgcccag ccacttagtt ttttcttatt
1681 cccacctttc tatcccatag aacactcttt tttatcttcc ctgaaccata ttgatgagat
1741 aaatagggct gggggctggg ccccgctggt cactcaacag agtatttccc ttggccgaga
1801 tggaagtttt gtcccaatag atgagctgct gagtatcaac aaggtgacat ttttctgctg
1861 cccatttgtg tcctggagac ggtggtaccc tgaaggcaga ggccagctgc cgcaagacag
1921 caatgacagt ccacctgccg acctgattcc tgcatcatgg aataaccaca tggctacctt
1981 ctatcctctg ttcccaaatg gtggtggcac ttatcctgaa gtcgtcaatg atttcccttt
2041 gaaactactt tattttacta atttaaacta ttttgtactg atgtagccct gaggtagttc
2101 atgaaaatgc tgtgcactca ttccatggaa taaatgttgg aaagctgatc ttttctgata
2161 taaaatgttg aatgataaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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