LOCUS BC007437 1989 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon-related developmental regulator 2, mRNA
(cDNA clone MGC:4235 IMAGE:2961581), complete cds.
ACCESSION BC007437
VERSION BC007437.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1989)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC007437.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48255963.
FEATURES Location/Qualifiers
source 1..1989
/db_xref="H-InvDB:HIT000033222"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4235 IMAGE:2961581"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1989
/gene="IFRD2"
/gene_synonym="IFNRP"
/gene_synonym="SKMc15"
/gene_synonym="SM15"
/db_xref="GeneID:7866"
/db_xref="HGNC:HGNC:5457"
/db_xref="MIM:602725"
CDS 182..1510
/gene="IFRD2"
/gene_synonym="IFNRP"
/gene_synonym="SKMc15"
/gene_synonym="SM15"
/codon_start=1
/product="interferon-related developmental regulator 2"
/protein_id="AAH07437.3"
/db_xref="GeneID:7866"
/db_xref="HGNC:HGNC:5457"
/db_xref="MIM:602725"
/translation="MPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTA
SECPSLLSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLA
LASRLLPDFLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFH
SLQPLLVSVLSDSTASPAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGL
GGSSTSPVVPASLHGLLSAALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNL
RIAAGETIALLFELARDLEEEFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFR
AVLHSVEGGECEEEIVRFGFEVLYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDI
FGLGPVLLLDATALKACKVPRFEKHLYNAAAFKARTKARSRVRDKRADIL"
BASE COUNT 376 a 602 c 591 g 420 t
ORIGIN
1 ctcgccttcc cggcgacctg tttggcaggg cggggcgcct cgcgaagatg gtggcgcgcg
61 cggcgtgtgg ctcccgtcgt ctggccaagt ctcagcgcag cgcaccggcc ggcgtctcgt
121 tggcctggag cccacaccca ccgggtccct gaccccgcgc cccccgcgcc cggttcccgg
181 catgcctcgc gcccgtaagg gcaacacgct ccggaagggt ggtcagcgcc gtggaggagg
241 tgcccggagc agtgcccaag ctgactcggg ttccagtgac gatgaggcag ccagtgaggc
301 ccgcagcacc gccagtgaat gccccagcct tctcagcacc actgcagagg acagccttgg
361 gggggatgtc gtggatgagc agggccagca ggaagacctt gaggaaaagc tgaaggagta
421 tgtggactgt ctcacagaca agagtgccaa gacccggcag ggtgctcttg agagcctgcg
481 cctggcccta gcgtcccgcc tactccccga cttcttgctg gagcgccgcc tcacgctagc
541 cgatgccctg gaaaagtgcc tcaagaaagg gaagggcgag gaacaagccc tggctgctgc
601 tgtgctaggc ctgctctgcg tgcagctggg ccctggacct aagggtgagg agctgtttca
661 cagcctgcag cctctgctgg tctctgtgct cagtgacagc acagctagcc ctgctgcccg
721 gctccactgt gcttctgccc ttggcctggg ctgctacgtg gctgccgctg acatccagga
781 cctggtctct tgccttgcct gcttagaaag tgttttcagc cggttctatg gcttgggggg
841 cagctccaca agtcctgtgg ttcctgccag cctgcacggc ctgctctctg ctgccctgca
901 ggcctgggca ttgctgctca ccatctgccc tagcacccaa atcagccaca tccttgacag
961 gcagctgccc cggctgcccc agctcttgtc cagtgaaagt gtgaacctgc ggatcgctgc
1021 cggtgaaacc attgcactgc tctttgagct tgcccgggac cttgaggagg agtttgttta
1081 cgaggacatg gaggccctct gcagtgtcct gcgcactctg gccactgaca gtaacaagta
1141 ccgtgccaag gctgatcgtc ggcgccagcg ctctactttc cgcgccgtgc tgcactccgt
1201 ggagggcggt gaatgcgaag aagagatagt gcgcttcggc tttgaggtgc tctacatgga
1261 cagctgggct cggcaccgga tctacgctgc cttcaaggaa gtgctgggtt cgggcatgca
1321 ccaccacctc cagaacaatg agctactccg tgacatcttt ggcctgggcc ctgtgctgtt
1381 gctggatgcc actgccctga aggcctgcaa ggttccacgc tttgagaagc acctgtacaa
1441 tgctgctgcc ttcaaagccc ggaccaaggc tcgaagccgt gtgcgggaca agcgggcaga
1501 catcctgtga agcaggacct gctgaagagg agactttcta tgcccttggt ccgtattttt
1561 aacagaagac agtgcaacaa ctggtctcca ccagtatttg tcactttatt ttttttaatg
1621 acaaaaccaa aaacagacat ggggtgggta gctgggggcc cggacacttg ggaccctgac
1681 ccctttgtcc ctgcactcag ccctgtggcc ccttcctgtc ctgtctcagg ccaggctaaa
1741 tatgtgcctt cctcagggct gtggggcagg cactaggggg cctttccctt cctttccttt
1801 ctcaggcctt gctcccccag gatgacccac tcttaggggg gtggtggcat ctggacaaat
1861 gccaccacag caggtggggt ggcaaagcta cctggaatgg atttgtgtgc tgatttttaa
1921 ggattattac agataattaa acagaacggt cagccttctg tggtcttaaa aaaaaaaaaa
1981 aaaaaaaaa
//