LOCUS BC007432 1646 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
alpha, mRNA (cDNA clone MGC:4020 IMAGE:2962847), complete cds.
ACCESSION BC007432
VERSION BC007432.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1646)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1646)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007432.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47933378.
FEATURES Location/Qualifiers
source 1..1646
/db_xref="H-InvDB:HIT000033218"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4020 IMAGE:2962847"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1646
/gene="NAPA"
/gene_synonym="SNAPA"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
CDS 82..969
/gene="NAPA"
/gene_synonym="SNAPA"
/codon_start=1
/product="N-ethylmaleimide-sensitive factor attachment
protein, alpha"
/protein_id="AAH07432.1"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
/translation="MDNSGKEAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEI
YARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAIN
CLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSS
ANKCLLKVAGYAALLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDM
LNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWL
TTMLLRIKKTIQGDEEDLR"
BASE COUNT 384 a 499 c 434 g 329 t
ORIGIN
1 atctgtgttc cgcggcccgg ccgcggctga gtcttcccag ggtcagggtc aggcgctttg
61 ctgagtccct ttgtggccgc catggacaat tccgggaagg aagcggaggc gatggcgctg
121 ttggccgagg cggagcgcaa agtgaagaac tcgcagtcct tcttctctgg cctctttgga
181 ggctcatcca aaatagagga agcatgcgaa atctacgcca gagcagcaaa catgttcaaa
241 atggccaaaa actggagtgc tgctggaaac gcgttctgcc aggctgcaca gctgcacctg
301 cagctccaga gcaagcacga cgcagccacc tgctttgtgg acgctggcaa cgcattcaag
361 aaagccgacc cccaagaggc cattaactgt ttgatgcgag caatcgagat ctacacagac
421 atgggccgat tcacgattgc ggccaagcac cacatctcca ttgctgagat ctatgagaca
481 gagttggtgg acatcgagaa ggccattgcc cactacgagc agtctgcaga ctactacaaa
541 ggcgaggagt ccaacagctc agccaacaag tgtctgctga aggtggctgg ttacgctgcg
601 ctgctggagc agtatcagaa ggccattgac atctacgaac aggtggggac caatgccatg
661 gacagccccc tcctcaagta cagcgccaaa gactacttct tcaaggcggc cctctgccac
721 ttctgcatcg acatgctcaa cgccaagctg gctgtccaaa agtatgagga gctgttccca
781 gctttctctg attcccggga atgcaagttg atgaaaaaat tgctagaggc ccacgaggag
841 cagaatgtgg acagctacac cgagtcggtg aaggaatacg actccatctc ccggctggac
901 cagtggctca ccaccatgct gctgcgcatc aagaagacca tccagggcga tgaggaggac
961 ctgcgctaag ccccacccag ccccccagtg cccgtcttcc tgtcccatct gctcagagag
1021 aggtggggcc gagacttgct ggagagcttc cctcctttcc catctgggga gtcccgcggg
1081 ccacagtggg caggtggcac cgggggtcag catgcagggg cgccagaggc ccaggctgct
1141 ggccggacag tcaccctctg ttctcgctac atcccttgcc ccctgtccat ttatttaagc
1201 ccccataggt gcccttcacc cccaaaacca gctgtacaga atctttgata cagacctatt
1261 tgctaggggt gctgccgggg atttggggtc agcatctggc cccctatctc ctgaccagct
1321 gagtcatgag gccggtttct ctctctctcc cacttttgtc ccccagccaa gctctaaagc
1381 acatgtagcc gctgagacct gctgtttctg ctgggggcag gctcctcttc ccccagcccc
1441 gggagcctcc cccagcttcc tgcagccccg acctctcagg ttagaccctg ggccctggag
1501 cttaggggat tctccccacc ccagccccac acctgctcct tccctaatgc tttgaggttt
1561 tcttggttgg aagctgcagc tggcccaaga aagaaaataa aaaacaacac ttttgcatga
1621 aaaaaaaaaa aaaaaaaaaa aaaaaa
//