LOCUS BC007402 869 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein D, mRNA (cDNA clone MGC:1803 IMAGE:3050012), complete cds. ACCESSION BC007402 VERSION BC007402.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 869) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 869) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC007402.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: h Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68161527. FEATURES Location/Qualifiers source 1..869 /db_xref="H-InvDB:HIT000033192" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1803 IMAGE:3050012" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..869 /gene="APOD" /db_xref="GeneID:347" /db_xref="HGNC:HGNC:612" /db_xref="MIM:107740" CDS 78..647 /gene="APOD" /codon_start=1 /product="apolipoprotein D" /protein_id="AAH07402.1" /db_xref="GeneID:347" /db_xref="HGNC:HGNC:612" /db_xref="MIM:107740" /translation="MVMLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLG RWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEP AKLEVKFSWFMPSAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETV DSLKNILTSNNIDVKKMTVTDQVNCPKLS" BASE COUNT 268 a 231 c 174 g 196 t ORIGIN 1 gctgattctg catctggaaa ctgccttcat cttgaaagaa aagctccagg tcccttctcc 61 agccacccag ccccaagatg gtgatgctgc tgctgctgct ttccgcactg gctggcctct 121 tcggtgcggc agagggacaa gcatttcatc ttgggaagtg ccccaatcct ccggtgcagg 181 agaattttga cgtgaataag tatctcggaa gatggtacga aattgagaag atcccaacaa 241 cctttgagaa tggacgctgc atccaggcca actactcact aatggaaaac ggaaagatca 301 aagtgttaaa ccaggagttg agagctgatg gaactgtgaa tcaaatcgaa ggtgaagcca 361 ccccagttaa cctcacagag cctgccaagc tggaagttaa gttttcctgg tttatgccat 421 cggcaccgta ctggatcctg gccaccgact atgagaacta tgccctcgtg tattcctgta 481 cctgcatcat ccaacttttt cacgtggatt ttgcttggat cttggcaaga aaccctaatc 541 tccctccaga aacagtggac tctctaaaaa atatcctgac ttctaataac attgatgtca 601 agaaaatgac ggtcacagac caggtgaact gccccaagct ctcgtaacca ggttctacag 661 ggaggctgca cccactccat gttacttctg cttcgctttc ccctacccca cccccccccc 721 ataaagacaa accaatcaac cacgacaaag gaagttgacc tgaacatgta accatgccct 781 accctgttac cttgctagct gcaaaataaa cttgttgctg acctgcaaaa aaaaaaaaaa 841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //