LOCUS BC007309 2818 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B2, mRNA (cDNA clone IMAGE:3352651), partial cds.
ACCESSION BC007309
VERSION BC007309.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2818)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2818)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: o Column: 16.
FEATURES Location/Qualifiers
source 1..2818
/db_xref="H-InvDB:HIT000086789"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3352651"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2818
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="IMGT/GENE-DB:854"
/db_xref="MIM:606939"
CDS <1..1507
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/codon_start=2
/product="ATP6V1B2 protein"
/protein_id="AAH07309.1"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="IMGT/GENE-DB:854"
/db_xref="MIM:606939"
/translation="NGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVN
GPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSC
EFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMI
QTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFA
IVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA
YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR
NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLM
KSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFER
NFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH"
BASE COUNT 721 a 603 c 658 g 836 t
ORIGIN
1 caacggggcc gcacccgagc tacccgtgcc caccggtggg ccggcggtgg gagctcggga
61 gcaggcgctg gcagtcagtc ggaactacct ctcccagcct cgcctcacat acaagacagt
121 atctggagtc aatggtccac tagtgatctt agatcatgtt aagtttccca ggtatgctga
181 aattgtccat ttgaccttac cggatggcac aaagagaagt gggcaagttc tggaagttag
241 tggttccaag gcagtagttc aggtatttga agggacttca ggtatagatg ctaagaaaac
301 gtcctgtgag tttactgggg atattctccg aacaccggtg tctgaggata tgcttggtcg
361 ggtattcaat ggatcgggaa aacccattga cagaggtcct gttgtactgg ccgaagactt
421 ccttgatatc atgggtcagc caatcaaccc tcaatgtcga atctacccag aggaaatgat
481 tcagactggc atttcggcca tcgatgggat gaacagtatt gctagggggc agaaaattcc
541 tatcttctct gctgctgggc taccacacaa tgagattgca gctcagatct gtcgccaggc
601 tggtttggta aagaaatcca aagatgtagt agactacagt gaggaaaatt ttgcaattgt
661 atttgctgct atgggtgtaa acatggaaac tgcccggttc ttcaaatctg actttgaaga
721 aaatggctca atggacaatg tctgcctctt tttgaacttg gctaatgacc caaccattga
781 gcgaattatc actcctcgcc tggctctaac cacagctgaa tttctggcgt accaatgtga
841 gaaacatgta ttggttattc taacagacat gagttcttat gctgaagcac ttcgagaggt
901 ttcagcagcc agggaagagg tacctggtcg acgaggtttt ccaggttaca tgtatacaga
961 tttagccacg atatatgaac gcgctgggcg agtggaaggg agaaacggct cgattactca
1021 aatccctatt ctaaccatgc ctaatgatga tatcactcac cccatcccag acttgactgg
1081 ctacattaca gaggggcaga tctatgtgga cagacagctg cacaacagac agatttatcc
1141 acctatcaat gtgctgccct cactatcacg gttaatgaag tctgctattg gagaagggat
1201 gaccaggaag gatcatgccg atgtatctaa ccagctatat gcgtgctatg ctattggaaa
1261 ggatgtgcaa gccatgaaag ctgtcgttgg agaagaagcc cttacctcag atgatcttct
1321 ctacttggaa tttctgcaga agtttgagag gaacttcatt gctcagggtc cttacgaaaa
1381 tcgcactgtc tttgagactt tggacattgg ctggcagcta ctccgaatct tccccaaaga
1441 aatgctgaag agaatccctc agagcaccct cagcgaattt taccctcgag actctgcaaa
1501 gcattagctg ctgcttctgc attgctccgc gctcttgtga aatactggtt ctgttttctt
1561 tattcctttt gcactctcgg ttcccacctt tgtgttggag tttaccatgt taccctgtaa
1621 ttaaaaacaa agaataggta acatattgtg ccagtgttgc aacgttttaa actgctaaca
1681 gaccttaaaa tatcccccta cctgggtcct cagtgctatg tttaaagtgc tgcagggatg
1741 gagtggcgtt ttcttattgc tgtatgtatt gtacatagtg gagtagttag ttacctgata
1801 acagtcttgt tatttgggtc tcttagacct tacctctcaa ctccctcaag agtaccagtc
1861 tctgaagtta taatgctttg gtctctacat taggggcaag atccagtctg agagaagtct
1921 cctttgagaa gggccaagag gctctttcct gagtgtttgc tttcggtttg ttggtatgcc
1981 tgtattgctg ggctgtgctg ctgctcgaag cagatggttt tgactgtctt tttgctcttt
2041 cctatataat gaatagatga gtgaaagtag ttttcttttt ctctttagta cttacgtatt
2101 gggattcctg tgtcttacag ctctccctct ccaaataata cacagaatcc tgcaactttt
2161 tgcacagctg gtatctgtct ggtagcagtg agaccccttg tcttggtgat ccttactggg
2221 tttccaagca gaggagtcac atgattacaa ttgccagtag agttgttgtt tggggtacaa
2281 gatgagaaga aagaaaaacc tacagccttt ctacattctg acatgctaac agtggtttaa
2341 gtttctaaag tgtttaccag atgctgaagg caaggggagg gagcagaagc acttatgttt
2401 acggatattt taaactctgt tagagagcag cctttgaaaa tccccaattt ggttctgctt
2461 tttgacctct ctctaccttt tcagggtaat ctttgtggca caaacgatag catttccaag
2521 ctttagagtt ttctgaattc ctgcgccttc ctgacgtgag ccctgagcga tcttctatgc
2581 agttctgcca tgcgtcctgt tggtctctct gtgttctttg ttacttgggt gcaatagcaa
2641 cttccctacc ccgtgcattc catctttcat gttgtgtaaa gttcttcact tttttctctg
2701 agggctgggg gttgggggag tcagcatgat tatattttaa tgtagaaaat gtgacatctg
2761 gatataaaat gaaaataaat gttaaattaa atggacctta aaaaaaaaaa aaaaaaaa
//