LOCUS BC007292 1670 bp mRNA linear HUM 23-FEB-2006 DEFINITION Homo sapiens Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans), mRNA (cDNA clone IMAGE:3349328). ACCESSION BC007292 VERSION BC007292.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1670) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1670) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: m Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1670 /db_xref="H-InvDB:HIT000086785" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3349328" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 373 a 465 c 503 g 329 t ORIGIN 1 ctttgagcgg cataagctga agaggcagga tgcagatgcc tggactctct ataagatcct 61 agacagctgc aaacagctga ctctggccca gggggcaggt gaggaggatc cgagtggcat 121 ggtgaccatc atcacaggcc ttccactgga caaccccagc gtgctttcag gccccatgca 181 ggcagccctg caggccgctg cccacgccag tgtggacatc aagaatgttc tggacttcta 241 caagcagtgg aaggaaattg gttgatactg acccccaggc cctgcagtgg ggctgactcc 301 agatctctcc tgccctccct ggcagccagg accagcacct gtagtcaccc caccacacgc 361 agactcatgc acgcacacag gagggaggcc tagctgctca gaggctgcag ggagggccca 421 ggagccggct gggagggtgg ggtccctttg ttgccaagac gttaggaaag cgaggaaagt 481 gcttggatta ggagagtctt gtgggcccct ggccagcctt cctgcctcag ctcccctgct 541 gtctccaggg gcaggtggta ggcatgggta cctgcatttc actggaatgg gttcttggat 601 ctctgagggg aaggaacagc aaaagaggcc cttcttcctc acccaagatg cagggtggtt 661 ggggccagga gtttggaccc tctaggtctt gggggaagag ctgggtaata cctggtgtct 721 gagtgattct ctgcagaccc ttcccctcct caaggatcac ccatcctcct ttcagccccc 781 tttatgggga ccaggcagct ctggagccag ccacaggggc tgttagagaa gcaaggcctg 841 gagtggcctg caccgagtag cagggtcagg gttcgtgtgc tcctcctcct gctgcagggg 901 ctgcacatcc cattgcccca cttctgcttt gtgtctccct ctgtctagct tccagggcag 961 ggagcaggcc ccacctaggg ctgcaggcag tctggcctgt gccagcacgg tctcctgtgc 1021 ccaccagccc cacaggtgct gtgctttgtg ctcttggctg ctgtgctggg acagaatggg 1081 atgccaggaa gagaagaaag ggggtgcagt ctgaggccac cacccccctt cctatctaag 1141 ggagggctga agacaagggg ccggcattca gtgggcagca gaaaggagag gctccttgaa 1201 gctgctcagt cagaggcccc cgtccctcct tttgccttcc gcaggactga agacctgaag 1261 gggctggctt ttggagtgtt gaggtgaata tctgggagca gagatcatga atagctcagg 1321 gcagtgaatg gcgcaccaag agcagggctg tgtgtgggag gctgcagcca ggattgcctc 1381 agctcctccc cctcaggctg ggaggatagc acaggctagg ggctcggggt ggagggtctc 1441 agctctgctg cccccacccc agtactagcc tagcttccca agctgtggct tagaggatag 1501 ttggcttcct gcctctctcc tctaaaatag caagtctggg aaatcctggg gtgagtggag 1561 tcaccccact cccagttgct ggcagagact gagactaaag catcacttaa taaacccccc 1621 aagcccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //