LOCUS BC007289 1632 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin related protein M1, mRNA (cDNA clone MGC:15664
IMAGE:3349184), complete cds.
ACCESSION BC007289
VERSION BC007289.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1632)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1632)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19549324.
FEATURES Location/Qualifiers
source 1..1632
/db_xref="H-InvDB:HIT000033122"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15664 IMAGE:3349184"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1632
/gene="ARPM1"
/gene_synonym="MGC15664"
/db_xref="GeneID:84517"
/db_xref="MIM:608534"
CDS 296..1414
/gene="ARPM1"
/gene_synonym="MGC15664"
/codon_start=1
/product="actin related protein M1"
/protein_id="AAH07289.1"
/db_xref="GeneID:84517"
/db_xref="MIM:608534"
/translation="MNHCQLPVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQSRA
AQGGLELCVGDQAQDWRSSLFISYPVERGLITSCEDMEIMWKHIYDYNLKLKPCDGPV
LITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQ
SVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYV
AMNYEEEMAKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHMNLEAPGIDKICF
SSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIAPPERKI
SVWMGGSILASLSAFQDMWITAAEFKEVGPNIVHQRCF"
BASE COUNT 402 a 387 c 443 g 400 t
ORIGIN
1 gttgaatctt ttgatgcgaa agtcgggttt tcctgatact gggattccgg gattccaggt
61 gttggggtgg cccaattcct gcgagaagca atagcgggcg gtaacatgag gagcacggtg
121 cgtccagcga gtccttccgc ctggggccct gccgaccccc tgcctgcgcc cccaggactc
181 tggcctcacc cggccgtgcc ggggcctctg tgacgcggcg ttccaggcac tcggccccgg
241 ccgagcccgt agctagagcg gctcagagac aggaggcggc ggcagcagcg gcggcatgaa
301 ccactgccag ctaccggtgg tgatcgacaa cggctcggga atgatcaagg cgggcgtggc
361 tgggtgccgg gagccccagt ttatctaccc gaacattatc ggccgcgcca agggccagag
421 ccgcgcggcc cagggcgggc tagaactctg cgtgggcgac caagctcagg actggaggag
481 ctcgctgttc atcagttacc cagtggagcg tggtctcatt acttcatgcg aggacatgga
541 gatcatgtgg aagcatatct atgactataa cctaaagctg aagccgtgtg atggcccagt
601 cttgattact gagccagcgc tgaacccact ggccaaccgg caacagatca cggaaatgtt
661 ttttgagcat ctgggtgttc ctgccttcta tatgtccatc caggctgtgc tggctctctt
721 tgctgctggc ttcactactg gccttgtgct gaattcaggt gctggggtta cccagagtgt
781 gcccatcttt gagggttact gtctgcctca tggtgtgcag caactggatc tggcaggcct
841 tgacctcacc aactacctca tggtgctaat gaagaaccat ggtatcatgt tgctcagtgc
901 ttcagacaga aagattgttg aagacatcaa ggagagcttt tgttatgtgg caatgaacta
961 cgaagaggaa atggccaaga aacccgattg tctagagaaa gtttaccaac tacctgatgg
1021 gaaggtcatc cagctccatg accagctctt ttcttgtcca gaggccctct tctctccgtg
1081 tcatatgaac cttgaggccc ctggcattga taagatatgc ttcagcagca taatgaaatg
1141 tgatacaggc ctgaggaatt ccttcttttc caatattatc cttgccgggg gatcaacctc
1201 tttccctggt ttagacaagc ggttagttaa ggatatagca aaggtggctc ctgccaacac
1261 cgctgtgcaa gttatagctc ctccagaaag gaaaatatca gtgtggatgg gaggttctat
1321 tcttgcatcc ttgtctgcct tccaggacat gtggatcact gctgcagaat ttaaagaagt
1381 tggacccaac atagtacacc aaagatgctt ctgaaataca gataaaatgg ttggaagaaa
1441 atgttttgag tatatgtgac agaaaacttt ggatattata tgtttctggg agaagagaaa
1501 atacttcacc tattgggatg ccaatatttc tgttgtattt ctataatggg tttgggggat
1561 aataatggtg aagctcaaga acagatgtct attgagtaga accaagttaa aataaaaaaa
1621 aaaaaaaaaa aa
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