LOCUS BC007288 2175 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens zinc finger, MIZ-type containing 1, mRNA (cDNA clone
IMAGE:3347864), partial cds.
ACCESSION BC007288
VERSION BC007288.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2175)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2175)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50234887.
FEATURES Location/Qualifiers
source 1..2175
/db_xref="H-InvDB:HIT000086783"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3347864"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2175
/gene="ZMIZ1"
/gene_synonym="hZIMP10"
/gene_synonym="MIZ"
/gene_synonym="Zimp10"
/db_xref="GeneID:57178"
/db_xref="HGNC:HGNC:16493"
/db_xref="MIM:607159"
CDS 573..>2175
/gene="ZMIZ1"
/gene_synonym="hZIMP10"
/gene_synonym="MIZ"
/gene_synonym="Zimp10"
/codon_start=1
/product="ZMIZ1 protein"
/protein_id="AAH07288.1"
/db_xref="GeneID:57178"
/db_xref="HGNC:HGNC:16493"
/db_xref="MIM:607159"
/translation="MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRA
FQRPFEQSLMGCLTVVSRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEE
LGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQP
PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAG
QQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADF
TQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP
GPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPG
PRPQSLPIQNIKRPYPGEPNYGNQQYVPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRM
PSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYP
HSPVPGNPTPPLLKKKKKKKKKKKKK"
BASE COUNT 484 a 746 c 626 g 319 t
ORIGIN
1 cgggcgccgg ggagagcggg cggccgggcg gcaggcgggc gagcagcgat cgggcggccg
61 agcgagcgag caacgccggc gcagcgcggt gaccccagcc ccagccggcg cggagcagga
121 gccggagccg agcggatctc ggcgccctcg ctgcgctcct cccggcccga gcctgcccta
181 cccggcggtg gcggcggcgc gtcctccagc ggcggcagcg gcgctcgcag cgcccggact
241 cacggcagct gtgttctgat ttcgtactac tgctggggct gccacctcct cctccagacg
301 ctctcagcag acttgagtcc tggtccttct gcagaggcct gagcaggagg aagaggagga
361 ggcccgttgg cgtcggacca atgctgcaag gggtgtgagg agaggagccg ctgtttttca
421 ctgagctgcc ataccccgaa agcaggatgg agctggagtg aggtggaggg gccgcaagct
481 gctgaccggc gtgtgggaca ctggtggttt gcagatcact gaggctggac aacgttcatg
541 gctctcgggt agaacctagt gaaacggcca gaatgaattc tatggacagg cacatccagc
601 agaccaatga ccgactgcag tgcatcaagc agcacttaca gaatcctgcc aacttccaca
661 atgccgccac ggagctgctg gactggtgcg gagacccacg ggccttccag cggcccttcg
721 agcagagcct gatgggctgt ttgacggtgg tcagtcgggt ggcagcccag caaggctttg
781 acctggacct cggctacaga ctgctggctg tgtgtgctgc aaaccgagac aagttcaccc
841 cgaagtctgc cgccttgttg tcctcctggt gcgaagagct cggccgcctg ctgctgctcc
901 gacatcagaa gagccgccag agcgatcccc ctgggaaact ccccatgcag ccccctctca
961 gctccatgag ctccatgaaa cccactctgt cgcacagtga tgggtcgttc ccctatgact
1021 ctgtcccttg gcagcagaac accaaccagc ctcccggctc cctttccgtg gtcaccacgg
1081 tttggggagt aaccaacaca tcccagagcc aggtccttgg gaaccctatg gccaatgcca
1141 acaaccccat gaatccaggc ggcaacccca tggcgtcggg catgaccacc agcaacccag
1201 gcctcaactc cccacagttt gcggggcagc agcagcagtt ctcagccaag gctggccccg
1261 ctcagcccta catccagcag agcatgtatg gccggcccaa ctaccccggc agcgggggct
1321 ttggggccag ttaccctggg ggtcctaacg cccccgcagg catgggcatc cctccgcaca
1381 ccaggccgcc tgctgacttc actcagcccg cggcagccgc tgcagcagcg gcagtggcag
1441 cagcagcagc cacagctaca gccacagcca cggccactgt ggcagccctg caggagacac
1501 agaacaagga tataaaccag tatggaccga tgggtcccac ccaggcgtat aacagccaat
1561 tcatgaacca gcccgggccg cgggggcctg cctccatggg gggcagcatg aaccccgcga
1621 gcatggcggc tggcatgacg ccctcgggga tgagcggccc tcccatgggc atgaaccagc
1681 cccggccgcc cggcatcagc ccctttggca cacacgggca gcggatgccc cagcagacct
1741 acccgggccc ccggccccag tcccttccta ttcagaacat aaagaggcca taccctggag
1801 agcccaacta tggaaaccag caatatgtac caaacagcca gttccccacc cagccaggcc
1861 agtacccagc ccccaacccc ccgaggccac tcacctcccc caactaccca ggacagagga
1921 tgcccagcca gccgagctcc gggcagtacc cgccccccac ggtcaacatg gggcagtatt
1981 acaagccaga acagtttaat ggacaaaata acacgttctc gggaagcagc tacagtaact
2041 acagccaagg gaatgtcaac aggcctccca ggccggttcc tgtggcaaat tacccccact
2101 cacctgttcc agggaacccc acaccccccc ttttaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaa
//