LOCUS BC007272 1288 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis), mRNA (cDNA clone MGC:15591 IMAGE:3161025), complete cds. ACCESSION BC007272 VERSION BC007272.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1288) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1288) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38027922. FEATURES Location/Qualifiers source 1..1288 /db_xref="H-InvDB:HIT000033110" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15591 IMAGE:3161025" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1288 /gene="COPS5" /gene_synonym="CSN5" /gene_synonym="JAB1" /gene_synonym="MGC3149" /gene_synonym="MOV-34" /gene_synonym="SGN5" /db_xref="GeneID:10987" /db_xref="HGNC:HGNC:2240" /db_xref="MIM:604850" CDS 110..1114 /gene="COPS5" /gene_synonym="CSN5" /gene_synonym="JAB1" /gene_synonym="MGC3149" /gene_synonym="MOV-34" /gene_synonym="SGN5" /codon_start=1 /product="COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)" /protein_id="AAH07272.1" /db_xref="GeneID:10987" /db_xref="HGNC:HGNC:2240" /db_xref="MIM:604850" /translation="MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKP WTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEG TETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQ FQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHC KQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQS EAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS " BASE COUNT 413 a 252 c 302 g 321 t ORIGIN 1 gtaagagttt gttcccgtgg tgcggagggt caaggcccac acccggaaac ctagcgaggt 61 aaagttgcgt cttggttgta gagacgacaa cttctccgct tcctcggcga tggcggcgtc 121 cgggagcggt atggcccaga aaacctggga actggccaac aacatgcagg aagctcagag 181 tatcgatgaa atctacaaat acgacaagaa acagcagcaa gaaatcctgg cggcgaagcc 241 ctggactaag gatcaccatt actttaagta ctgcaaaatc tcagcattgg ctctgctgaa 301 gatggtgatg catgccagat cgggaggcaa cttggaagtg atgggtctga tgctaggaaa 361 ggtggatggt gaaaccatga tcattatgga cagttttgct ttgcctgtgg agggcactga 421 aacccgagta aatgctcagg ctgctgcata tgaatacatg gctgcataca tagaaaatgc 481 aaaacaggtt ggccgccttg aaaatgcaat cgggtggtat catagccacc ctggctatgg 541 ctgctggctt tctgggattg atgttagtac tcagatgctc aatcagcagt tccaggaacc 601 atttgtagca gtggtgattg atccaacaag aacaatatcc gcagggaaag tgaatcttgg 661 cgcctttagg acatacccaa agggctacaa acctcctgat gaaggacctt ctgagtacca 721 gactattcca cttaataaaa tagaagattt tggtgtacac tgcaaacaat attatgcctt 781 agaagtctca tatttcaaat cctctttgga tcgcaaattg cttgagctgt tgtggaataa 841 atactgggtg aatacgttga gttcttctag cttgcttact aatgcagact ataccactgg 901 tcaggtcttt gatttgtctg aaaagttaga gcagtcagaa gcccagctgg gacgagggag 961 tttcatgttg ggtttagaaa cgcatgaccg aaaatcagaa gacaaacttg ccaaagctac 1021 aagagacagc tgtaaaacta ccatagaagc tatccatgga ttgatgtctc aggttattaa 1081 ggataaactg tttaatcaaa ttaacatctc ttaaacagtc tctgagaagt actttacctg 1141 aaagacagta tgagaaaaat attcaagtaa cactttaaaa ccagttaccc aaaatctgat 1201 tagaagtata aggtgctctg aagtgtccta aatattaata tcctgtaata aagctcttta 1261 aaatgaaaaa aaaaaaaaaa aaaaaaaa //