LOCUS BC007265 1952 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon-related developmental regulator 2, mRNA
(cDNA clone MGC:15551 IMAGE:3138466), complete cds.
ACCESSION BC007265
VERSION BC007265.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48255963.
FEATURES Location/Qualifiers
source 1..1952
/db_xref="H-InvDB:HIT000033106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15551 IMAGE:3138466"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1952
/gene="IFRD2"
/gene_synonym="IFNRP"
/gene_synonym="SKMc15"
/gene_synonym="SM15"
/db_xref="GeneID:7866"
/db_xref="HGNC:HGNC:5457"
/db_xref="MIM:602725"
CDS 157..1485
/gene="IFRD2"
/gene_synonym="IFNRP"
/gene_synonym="SKMc15"
/gene_synonym="SM15"
/codon_start=1
/product="interferon-related developmental regulator 2"
/protein_id="AAH07265.1"
/db_xref="GeneID:7866"
/db_xref="HGNC:HGNC:5457"
/db_xref="MIM:602725"
/translation="MPRARKGNTLRKGGQRRGGGARSSAQADSGSSDDEAASEARSTA
SECPSLLSTTAEDSLGGDVVDEQGQQEDLEEKLKEYVDCLTDKSAKTRQGALESLRLA
LASRLLPDFLLERRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGPGPKGEELFH
SLQPLLVSVLSDSTASPAARLHCASALGLGCYVAAADIQDLVSCLACLESVFSRFYGL
GGSSTSPVVPASLHGLLSAALQAWALLLTICPSTQISHILDRQLPRLPQLLSSESVNL
RIAAGETIALLFELARDLEEEFVYEDMEALCSVLRTLATDSNKYRAKADRRRQRSTFR
AVLHSVEGGECEEEIVRFGFEVLYMDSWARHRIYAAFKEVLGSGMHHHLQNNELLRDI
FGLGPVLLLDATALKACKVPRFEKHLYNAAAFKARTKARSRVRDKRADIL"
BASE COUNT 372 a 590 c 581 g 409 t
ORIGIN
1 cagggcgggg cgcctcgcga agatggtggc gcgcgtggcg tgtggctccc gtcgtctggc
61 caagtctcag cgcagcgcac cggccggcgt ctcgttggcc tggagcccac acccaccggg
121 tccctgaccc cgcgcccccc gcgcccggtt cccggcatgc ctcgcgcccg taagggcaac
181 acgctccgga agggtggtca gcgccgtgga ggaggtgccc ggagcagtgc ccaagctgac
241 tcgggttcca gtgacgatga ggcagccagt gaggcccgca gcaccgccag tgaatgcccc
301 agccttctca gcaccactgc agaggacagc cttggggggg atgtcgtgga tgagcagggc
361 cagcaggaag accttgagga aaagctgaag gagtatgtgg actgtctcac agacaagagt
421 gccaagaccc ggcagggtgc tcttgagagc ctgcgcctgg ccctagcgtc ccgcctactc
481 cccgacttct tgctggagcg ccgcctcacg ctagccgatg ccctggaaaa gtgcctcaag
541 aaagggaagg gcgaggaaca agccctggct gctgctgtgc taggcctgct ctgcgtgcag
601 ctgggccctg gacctaaggg tgaggagctg tttcacagcc tgcagcctct gctggtctct
661 gtgctcagtg acagcacagc tagccctgct gcccggctcc actgtgcttc tgcccttggc
721 ctgggctgct acgtggctgc cgctgacatc caggacctgg tctcttgcct tgcctgctta
781 gaaagtgttt tcagccggtt ctatggcttg gggggcagct ccacaagtcc tgtggttcct
841 gccagcctgc acggcctgct ctctgctgcc ctgcaggcct gggcattgct gctcaccatc
901 tgccctagca cccaaatcag ccacatcctt gacaggcagc tgccccggct gccccagctc
961 ttgtccagtg aaagtgtgaa cctgcggatc gctgccggtg aaaccattgc actgctcttt
1021 gagcttgccc gggaccttga ggaggagttt gtttacgagg acatggaggc cctctgcagt
1081 gtcctgcgca ctctggccac tgacagtaac aagtaccgtg ccaaggctga tcgtcggcgc
1141 cagcgctcta ctttccgcgc cgtgctgcac tccgtggagg gcggtgaatg cgaagaagag
1201 atagtgcgct tcggctttga ggtgctctac atggacagct gggctcggca ccggatctac
1261 gctgccttca aggaagtgct gggttcgggc atgcaccacc acctccagaa caatgagcta
1321 ctccgtgaca tctttggcct gggccctgtg ctgttgctgg atgccactgc cctgaaggcc
1381 tgcaaggttc cacgctttga gaagcacctg tacaatgctg ctgccttcaa agcccggacc
1441 aaggctcgaa gccgtgtgcg ggacaagcgg gcagacatcc tgtgaagcag gacctgctga
1501 agaggagact ttctatgccc ttggtccgta tttttaacag aagacagtgc aacaactggt
1561 ctccaccagt atttgtcact ttattttttt taatgacaaa accaaaaaca gacatggggt
1621 gggtagctgg gggcccggac acttgggacc ctgacccctt tgtccctgca ctcagccctg
1681 tggccccttc ctgtcctgtc tcaggccagg ctaaatatgt gccttcctca gggctgtggg
1741 gcaggcacta gggggccttt cccttccttt cctttctcag gccttgctcc cccaggatga
1801 cccactctta ggggggtggt ggcatctgga caaatgccac cacagcaggt ggggtggcaa
1861 agctacctgg aatggatttg tgtgctgatt tttaaggatt attacagata attaaacaga
1921 acggtcagcc ttcaaaaaaa aaaaaaaaaa aa
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