LOCUS BC007256 3271 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens zinc finger protein 23 (KOX 16), mRNA (cDNA clone MGC:15514 IMAGE:3028040), complete cds. ACCESSION BC007256 VERSION BC007256.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3271) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3271) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: e Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23308736. FEATURES Location/Qualifiers source 1..3271 /db_xref="H-InvDB:HIT000033100" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15514 IMAGE:3028040" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3271 /gene="ZNF23" /gene_synonym="KOX16" /gene_synonym="Zfp612" /gene_synonym="ZNF612" /db_xref="GeneID:7571" /db_xref="HGNC:HGNC:13023" /db_xref="MIM:194527" CDS 815..2746 /gene="ZNF23" /gene_synonym="KOX16" /gene_synonym="Zfp612" /gene_synonym="ZNF612" /codon_start=1 /product="zinc finger protein 23 (KOX 16)" /protein_id="AAH07256.1" /db_xref="GeneID:7571" /db_xref="HGNC:HGNC:13023" /db_xref="MIM:194527" /translation="MLENYGNVASLGFPLLKPAVISQLEGGSELGGSSPLAAGTGLQG LQTDIQTDNDLTKEMYEGKENVSFELQRDFSQETDFSEASLLEKQQEVHSAGNIKKEK SNTIDGTVKDETSPVEECFFSQSSNSYQCHTITGEQPSGCTGLGKSISFDTKLVKHEI INSEERPFKCEELVEPFRCDSQLIQHQENNTEEKPYQCSECGKAFSINEKLIWHQRLH SGEKPFKCVECGKSFSYSSHYITHQTIHSGEKPYQCKMCGKAFSVNGSLSRHQRIHTG EKPYQCKECGNGFSCSSAYITHQRVHTGEKPYECNDCGKAFNVNAKLIQHQRIHTGEK PYECNECGKGFRCSSQLRQHQSIHTGEKPYQCKECGKGFNNNTKLIQHQRIHTGEKPY ECTECGKAFSVKGKLIQHQRIHTGEKPYECNECGKAFRCNSQFRQHLRIHTGEKPYEC NECGKAFSVNGKLMRHQRIHTGEKPFECNECGRCFTSKRNLLDHHRIHTGEKPYQCKE CGKAFSINAKLTRHQRIHTGEKPFKCMECEKAFSCSSNYIVHQRIHTGEKPFQCKECG KAFHVNAHLIRHQRSHTGEKPFRCVECGKGFSFSSDYIIHQTVHTWKKPYMCSVCGKA FRFSFQLSQHQSVHSEGKS" BASE COUNT 1024 a 668 c 825 g 754 t ORIGIN 1 cggaggtgag tgcagggctc cgggcgctgt gtgccgtgcc ctgtccccca ggctctgggt 61 ccggttgaga cgcactccca ccctgggtgc tgcagggtct cccgtggcct acgctgccag 121 gaggcccagg ctgggagagg gagcagggcg gcggcccggg gtgctcttcc gcgctcctcg 181 actccagctt tggtctttgt ggctcaatag cttgcgccca ttggaagggg aaacgcacgt 241 tgctgtccca gccacgaggc cctgagcatt tagcacttgg tcgacggggg aagatgtgtc 301 ggtgcagcta aaagatggaa tatttgcggg cgtgaagcgg cccgaggtga taccacaagt 361 cttttgacat gctgaggtct ggcaggaaca ttaacctatg tgcatcccga gtatggaccg 421 tgtgctccca ggctcctgac atagggtcat gaattagggc cgagtgggag cgcagagccc 481 ctcccagtca cccggcagca gaagcagccc ggcttttgga ggacattgtc tcctggagca 541 gtgtcagtcc caaaagctcc agcccttctc tgagacgggg accaggggat ggcagccatg 601 cacctgacag cctggcccca gggacttcac ggatcccctg aagctcatcc atggacttcc 661 atggactaca gggcctgagc tatggaattg gccctagggc agcaggaacc tattgtttca 721 gaagtcggtg acctttgagg acgtggctgt gtacttcacc caggcggaat gggatggcct 781 gtcccctgca cagaggaccc tgtacaggga tgtgatgctg gagaattatg ggaatgtggc 841 ctccctggga tttccacttc tcaaacctgc tgtgatctca caactggagg gaggaagtga 901 gctggggggc tcatctccac tggctgcagg aacaggcctc cagggcctcc agactgatat 961 tcagactgac aatgatttga caaaggaaat gtatgaagga aaagagaatg tatcatttga 1021 acttcaaaga gacttttccc aggaaacaga cttttcagaa gcctctcttc tagagaaaca 1081 acaggaagtc cactcagcag gaaatataaa gaaggagaag agcaacacca ttgatggaac 1141 agtgaaagat gagacaagcc ccgtggagga gtgttttttt agtcaaagtt caaactcata 1201 tcagtgtcat accatcactg gagagcagcc ctctgggtgt acaggattgg ggaaatccat 1261 cagctttgat acaaaactcg tgaagcatga aataattaat tctgaggaaa gacctttcaa 1321 atgtgaagaa ttagtagagc cctttaggtg tgactctcaa cttattcaac atcaagagaa 1381 caacactgag gaaaagcctt atcagtgttc ggagtgtggc aaagctttca gcattaatga 1441 gaaattaatt tggcatcaga gacttcacag tggggagaaa cccttcaaat gtgtggagtg 1501 tgggaaaagc ttcagctaca gttcccatta tatcacacat cagacaatcc acagtgggga 1561 gaagccctat cagtgtaaga tgtgtgggaa ggccttcagt gttaatggaa gcctaagtag 1621 gcatcagaga atccatacgg gagagaagcc ctatcagtgc aaggaatgtg gaaatggctt 1681 cagctgtagt tctgcatata ttacacatca gagagtccac actggagaga aaccttacga 1741 gtgtaatgac tgtgggaaag cgttcaatgt taatgcaaaa ttaattcaac atcagagaat 1801 ccatactgga gagaaacctt atgaatgtaa tgaatgtgga aaaggcttca ggtgcagctc 1861 ccagcttagg cagcatcaga gcatccacac aggagaaaag ccctatcagt gtaaagagtg 1921 tggaaaaggc ttcaataata atacaaaact cattcagcat cagagaatcc acacaggtga 1981 gaaaccctat gaatgcactg aatgtggaaa agccttcagt gtcaaaggga agttaatcca 2041 acaccagaga attcacacag gcgagaaacc ctatgagtgt aatgaatgcg ggaaagcctt 2101 cagatgtaac tcccaatttc ggcagcatct gagaattcac actggggaga agccctatga 2161 gtgtaatgag tgtggaaagg ccttcagcgt taatgggaaa ctaatgcggc atcagagaat 2221 tcacactggg gagaaacctt ttgaatgtaa tgagtgtggg agatgcttta cttctaaaag 2281 aaacctactt gatcatcacc gaatccatac tggagaaaag ccctatcaat gtaaggaatg 2341 tgggaaagcc ttcagtatca atgccaaact aactaggcat cagaggatac atactgggga 2401 gaaacctttc aaatgtatgg aatgtgagaa agcattcagc tgtagttcta actatattgt 2461 gcaccagaga atccatacag gagagaaacc ctttcagtgt aaggagtgtg gaaaagcctt 2521 ccatgttaat gcccatttaa ttcggcatca gagaagccac actggggaga aacccttcag 2581 atgtgtggaa tgtggcaaag gcttcagctt tagttctgac tacattatac atcagacagt 2641 ccacacttgg aagaaaccct atatgtgtag tgtgtgtggg aaagcattca ggtttagctt 2701 ccagctcagt cagcatcaga gtgtccatag tgaaggaaaa tcctaataat gagaaagata 2761 cagaaaactc ttaaggttaa tgccaaaatg gatcaagtat catcagattc atccattgaa 2821 aaacctccaa gagggcatga atatggcaga gtcttcatat ggaaacagtt tttattctat 2881 tcagtttaaa tcaggaaagg atgaccagtt aaagagaaac atccaaaaat agctttgttt 2941 tgtaccaaca ggaattagaa aatataatga aaagatttcg ttcccagcag catcaagaaa 3001 agtagatttt ctagaaataa acagttatgg aggacttgta tggagaaatt taagtcttca 3061 ctgagggcca ctttacaaag gaaatttgaa taaatggaga gagagagaag ccttgttgtt 3121 ggataggaaa acccgtacta aagatactct acctacatta atttatttgt ttaatttttg 3181 acaacaagca tgtattactt ttgaaaagat gaaaaataaa gatttattta aaaaaggaaa 3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa c //