LOCUS BC007239 1438 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, BED-type containing 3, mRNA (cDNA clone
MGC:15435 IMAGE:2906114), complete cds.
ACCESSION BC007239
VERSION BC007239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1438)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1438)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: a Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150184.
FEATURES Location/Qualifiers
source 1..1438
/db_xref="H-InvDB:HIT000033090"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15435 IMAGE:2906114"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1438
/gene="ZBED3"
/gene_synonym="MGC15435"
/db_xref="GeneID:84327"
/db_xref="HGNC:HGNC:20711"
CDS 248..952
/gene="ZBED3"
/gene_synonym="MGC15435"
/codon_start=1
/product="zinc finger, BED-type containing 3"
/protein_id="AAH07239.1"
/db_xref="GeneID:84327"
/db_xref="HGNC:HGNC:20711"
/translation="MRSGEPACTMDQARGLDDAAARGGQCPGLGPAPTPTPPGRLGAP
YSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFHAGTSALWRHLRSAHRRELE
SSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQG
ERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGALGWAPAAPPPLKD
DPEGDRDGCVITKVLL"
BASE COUNT 268 a 470 c 503 g 197 t
ORIGIN
1 ccgggacaaa atgtcagcga ggcgcctgga gggggatcta ccatctcgga ctcccgaccc
61 gccgccggct ccggccgcgt ttcccgggta aagggcactg ctgatggttc ttcagaactc
121 aggaatcgtg ttgcatgcat tgtttctacc cacctgagat ggttggaaac cctgaggcaa
181 tgacagggac cccagaatcc ttgggaaatt acccactgtc taatttaaag cgtgcgggcg
241 ccgcagaatg aggagtggcg agccggcctg caccatggac caggcccgcg ggctggacga
301 cgcggcggcg cggggcggtc agtgtccggg actggggccg gcgccgacgc cgacgcctcc
361 cggccgcctg ggggcgccat actccgaggc ctggggctac ttccacctgg cgccggggcg
421 ccccgggcat ccgtcgggcc actgggccac ctgccgtctg tgcggggagc aggtgggccg
481 cggcccgggc ttccacgcgg ggacctcggc gttgtggagg cacctgagga gcgcgcaccg
541 gcgggagctg gagagcagcg gcgccgggag ctccccacct gccgcgccct gcccgccgcc
601 gcccggcccc gctgcggccc ccgagggcga ctgggcgcgc ctgctggaac agatgggcgc
661 gctggccgtg cgcggcagcc ggcgggagcg ggagctggag cggcgcgagc tggccgtgga
721 gcagggcgag cgcgccctgg agcggaggcg gagggcgctg caggaggaag agcgcgccgc
781 ggcccaggcg cgccgggaac tgcaggccga gcgggaggcg ctgcaggcgc ggctgcggga
841 tgtgagccgc cgtgagggcg ccctgggctg ggcccccgct gcgccgccgc cgctcaagga
901 cgaccccgag ggtgacaggg acggctgcgt catcacaaag gtcctcctgt aggggtgtgg
961 ccacttcccc accccaggac agcgcttctc cgtccaatgc caatgccttc agaccccgct
1021 gggaccgaag ccgtaaccga agccaggccc gcagccgcta ctcactcgga agctccagct
1081 aactgtagga tcttccacac cctaaggctt cagcttgaga agcacttcga agccagagca
1141 gaaccaaaac tcacttccat ggggtcaccg ggggtgcctg ggcggccttt cgtgggcatg
1201 cacgcaagga attggggtgg cacacgggac acccgagagc tccaggagcc ccgtgaaccc
1261 agaccaccca gtgccatggc cacttagggc tgggaacccg aacctggtga ctttgaaagg
1321 atagagcttc attccatacc aaagacttat cacaccatgt gcctatacac ccagcagccc
1381 aaggtggagg gtgcgtggaa atgagaaagc tttttacccc aaaaaaaaaa aaaaaaaa
//