LOCUS BC007233 2382 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:15408 IMAGE:2961350), complete cds. ACCESSION BC007233 VERSION BC007233.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2382) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2382) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: c Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42734435. FEATURES Location/Qualifiers source 1..2382 /db_xref="H-InvDB:HIT000258918" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15408 IMAGE:2961350" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2382 /gene="EFHD2" /gene_synonym="MGC4342" /gene_synonym="RP3-467K16.3" /db_xref="GeneID:79180" /db_xref="HGNC:HGNC:28670" CDS 36..758 /gene="EFHD2" /gene_synonym="MGC4342" /gene_synonym="RP3-467K16.3" /codon_start=1 /product="EF-hand domain family, member D2" /protein_id="AAH07233.1" /db_xref="GeneID:79180" /db_xref="HGNC:HGNC:28670" /translation="MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEA AEALGSADCELSAKLLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFK QYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKA AAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEER KKQAEEMKQRKAAFKELQSTFK" BASE COUNT 477 a 743 c 720 g 442 t ORIGIN 1 ggggcccggc caaggcgagt gccgcgcggg ccaccatggc cacggacgag ctggccacca 61 agctgagccg gcggctgcag atggagggcg agggcggcgg cgagaccccg gagcagcccg 121 ggctgaacgg ggcagcggcg gcggcggcgg gggcacccga cgaggcggcc gaggcgctgg 181 gcagcgcgga ctgcgagctg agcgccaagc tgctgcggcg cgcagacctc aaccagggca 241 tcggcgagcc ccagtcgccc agccgccgcg tcttcaaccc ctacaccgag ttcaaggagt 301 tctccaggaa gcagatcaag gacatggaga agatgttcaa gcagtatgat gccgggcggg 361 acggcttcat cgacctgatg gagctaaaac tcatgatgga gaaacttggg gcccctcaga 421 cccacctggg cctgaaaaac atgatcaagg aggtggatga ggactttgac agcaagctga 481 gcttccggga gttcctcctg atcttccgca aggcggcggc cggggagctt caggaggaca 541 gcgggctgtg cgtgctggcc cgcctctctg agatcgacgt ctccagtgag ggtgtcaagg 601 gggccaagag cttctttgag gccaaggtcc aggccatcaa cgtgtccagc cgcttcgagg 661 aggagatcaa ggcagagcag gaggaaagga agaagcaggc ggaggagatg aagcagcgga 721 aagcggcctt caaggagctg cagtccacct ttaagtagcg ggggctgcag ccgaccgccc 781 tgctccggcc ccagtgtggt gggcgagggt ggcgcatggg aggccgagcc tgaatccttg 841 cctgtgtctg acgggaccac tactaaaaac ctaaaaatat ctgtgaatgg agcaagttca 901 ggggtcttat ggaggtggcc cggcccctcc ccgctccctt ccactctgca cgaggccgcc 961 acaccggcgc tggctccctg cccggcccgg ccctccctgg caatccctgg gctctcttgc 1021 acccctaact gccccctgcc tgctccggca ctgccccagg cccagctcct ggccctaggt 1081 ccctcccagc cccatgtgcc tgccgcctgc cctccacaca tccctgtccc cccaacccgg 1141 gaacccctgc cctcctccag caggccgcac cgcccctggg gccccctgcc agccccttcc 1201 caggctggga gacagcagaa gagatagaat cagggctgcc cccacagagt gggacccaag 1261 gggctaattg gaggcacgag gggacccctc cccagggcct tttcctcctc tgcgtcttcc 1321 atctactgaa atgggagagg gggtggggag cttctgttct ggtgaaggga cccgggcagg 1381 cccccagcac cccatgctga cttggagaac cccagatctc tggggcccag ccaggcaggg 1441 tgtgggggca gctgtgccaa tctacctcac aggcccaccc cctgccgggc atgccgtggg 1501 atcatgggca gggaaggctc tgggggtcgg agacatcgct gcttagcacc cccagccaga 1561 acaccctgag ggtctcgggg ctctggagag agtggggcgg gaggaagaat tggcaccttc 1621 ctagggaagg agacgagcgc ttcgccttga ttctccgaga agcctccgag aagtgcttta 1681 agtgtgtttg catgcgccag gcggtgggca gcgggggcct gtccagccct ctcccgccat 1741 ccttccccaa gtgacgtcca ctgccttgtc accagcgacc tgcctgtcat gcccaccccc 1801 tgaggaagca tggggaccct aacaccctgg tgccctgcac cagacaggcc gtggtcaggc 1861 ccaggccacc ggccgggttc tgccacagct tcccacgtgc ttgctgacat gcgtgtgcct 1921 gtgtgtggtg tctgttgctg tgtcgtgaaa ctgtgaccat cactcagtcc aaacaagtga 1981 gtggccctcg aggccacagt tatgcaactt tcagtgtgtg tcataacgac gtcactgctt 2041 tttaaactcg ataactcttt attttagtaa aatgcccagg agtcctggaa gctacgcgga 2101 cttgcagagg ttttattttt tggccttaga atctgcagaa attaggaggc accgagccca 2161 gcgcagcagc ctcggacccg gattgcgttt gccttagcgg atatgtttat acagatgaat 2221 ataaaatgtt tttttctttg ggctttttgc ttcttttttc ccccccttct caccttccct 2281 tctccccgac cccacccccc aaaaaagcta cttcttcatt ccgtggtacg attatttttt 2341 ttaactaaag gaagataaaa ttctaaaaaa aaaaaaaaaa aa //