LOCUS BC007123 3140 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ATPase family, AAA domain containing 2, mRNA (cDNA
clone IMAGE:3454033), with apparent retained intron.
ACCESSION BC007123
VERSION BC007123.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3140)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3140)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497617
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3140
/db_xref="H-InvDB:HIT000033061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3454033"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 995 a 593 c 733 g 819 t
ORIGIN
1 gatctctctc cggtcgcgca cgccgaggcc agtagggaga gaagatggtg gttctccgca
61 gcagcttgga gctgcacaac cactccgcgg cctcggccac gggctccttg gacctgtcca
121 gtgacttcct cagtctggag cacatcggcc ggaggcggct ccgctcggcc ggcgcggcgc
181 agaagaaacc cgcggcgacc acagccaaag cgggcgatgg gtcatcagtt aaggaagttg
241 aaacctacca ccggacacgt gctttaagat ctttgagaaa agatgcacag aattcttcag
301 attctagttt tgagaagaat gtggaaataa cggagcaact tgctaatggc aggcatttta
361 caaggcagtt ggccagacag caggctgata aaaaaaaaga agagcacaga gaagacaaag
421 tgattccagt tactcggtca ttgagggcta gaaacatcgt tcaaagtaca gaacacttac
481 atgaagataa tggtgatgtt gaagtgcgtc gaagttgtag gattagaagt cgttatagtg
541 gtgtaaacca gtccatgctg tttgacaaac ttataactaa cactgctgaa gctgtacttc
601 aaaaaatgga tgacatgaag aagatgcgta gacagcgaat gagagaactt gaagacttgg
661 gagtgtttaa tgaaacagaa gaaagcaatc ttaatatgta cacaagagga aaacagaaag
721 atattcaaag aactgatgaa gaaacaactg ataatcaaga aggcagtgtg gagtcatctg
781 aagagggtga agaccaagaa catgaagatg atggtgaaga tgaagatgat gaagatgatg
841 atgatgatga cgatgatgat gatgatgatg atgatgaaga tgatgaagat gaagaagatg
901 gagaagaaga gaatcagaag cgatattatc ttagacagag aaaagctact gtttactatc
961 aggctccatt ggaaaaacct cgtcaccaga gaaagcccaa catattttat agtggcccag
1021 cttctcctgc aagaccaaga taccgattat cttccgcagg accaagaagt ccttactgta
1081 aacgaatgaa caggcgaagg catgcaatcc acagtagtga ctcgacttca tcttcctcct
1141 ctgaagatga acagcacttt gagaggcgga ggaaaaggag tcgtaatagg gctatcaata
1201 ggtgcctccc actaaatttt cggaaagatg aattaaaagg catttataaa gatcgaatga
1261 aaattggagc aagccttgcc gatgttgatc caatgcaact agattcttca gtacgatttg
1321 atagtgttgg tggcctgtct aatcatatag cagctctaaa agagatggtg gtgtttccat
1381 tactttatcc agaagtcttt gaaaaattta aaattcaacc cccaagaggt tgtttgtttt
1441 atgggccacc tggaactgga aagactctgg ttgccagagc acttgccaat gagtgcagtc
1501 aaggggataa aagagtagca tttttcatga ggaaaggtgc tgattgtcta agtaaatggg
1561 taggagaatc tgaaagacag ctacgattgc tgtttgatca ggcctatcag atgcgcccat
1621 caattatttt ttttgacgaa attgatggtc tggctccagt acggtcaagc aggcaagatc
1681 agattcacag ttctattgtt tccaccctgc tagctcttat ggatggattg gacagcagag
1741 gggaaattgt ggtcattggt gctacgaaca ggctagattc tatagatcct gctttacgaa
1801 ggcctggtcg ctttgataga gaattcctct ttagcctgcc tgataaagag gctcgaaaag
1861 agattctaaa gattcacacc agggattgga atcccaaacc actggacaca tttttagaag
1921 agctagcaga aaactgtgtt ggatactgtg gagcagatat taaatcaata tgtgctgaag
1981 ctgctttatg tgctttacga cgacgctacc cacagatcta taccactagt gagaaactgc
2041 agttggatct ctcttcaatt aatatctcag ctaaggattt cgaggtagct atgcaaaaga
2101 tgataccagc ctcccaaaga gctgtgacat cacctgggca ggcactgtcc accgttgtga
2161 aaccactcct gcaaaacact gttgacaaga ttttagaagc cctgcagaga gtatttccac
2221 atgcagaatt cagaacaaat aaaacattag actcagatat ttcttgtcct ctgctagaaa
2281 gtgacttggc ttacagtgat gatgatgttc catcagttta tgaaaatgga ctttctcaga
2341 aatcttctca taaggcaaaa gacaatttta attttcttca tttgaataga aatgcttgtt
2401 accaacctat gtcttttcga ccaagaatat tgatagtagg agaaccagga tttgggcaag
2461 gttctcactt ggcaccagct gtcattcatg ctttggaaaa gtttactgta tatacattag
2521 acattcctgt tctttttgga gttagtacta catcccctga agaaacatgt gcccaggtga
2581 ttcgtgaagc taagagaaca gcaccaagta tagtgtatgt tcctcatatc cacgtgtggt
2641 gggaaatagt tggaccgaca cttaaagcca catttaccac attattacag aatattcctt
2701 catttgctcc agttttacta cttgcaactt ctgacaaacc ccattccgct ttgccagaag
2761 aggtaattta tgtggggcgg tatcattata ctttcaaaaa gagttgtttc taccacaata
2821 atcataactt attgaaaaaa ttcaaatgct gtagaagtga ataaaaggat aagttttctt
2881 atcaaatata ccattggtaa ctatttggta tatgtgctca ttgggcaaga tggtatatgt
2941 atatgtgtat gtatatatta aggatacata aattttttct cttgaaaaat ggtattatat
3001 gccgggtgca gtggctcacg cctgtaatcc cagcactttg ggaggccgag gtgggtggat
3061 catgaggtca ggagattgag accatcctgg ctagcagggt gaaaccctgt ccctactaaa
3121 aatacaaaaa aaaaaaaaaa
//