LOCUS BC007112 1501 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DNA fragmentation factor, 45kDa, alpha polypeptide,
mRNA (cDNA clone MGC:14770 IMAGE:4292811), complete cds.
ACCESSION BC007112
VERSION BC007112.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1501)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1501)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47132578.
FEATURES Location/Qualifiers
source 1..1501
/db_xref="H-InvDB:HIT000033057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14770 IMAGE:4292811"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1501
/gene="DFFA"
/gene_synonym="DFF-45"
/gene_synonym="DFF1"
/gene_synonym="ICAD"
/db_xref="GeneID:1676"
/db_xref="HGNC:HGNC:2772"
/db_xref="MIM:601882"
CDS 70..1065
/gene="DFFA"
/gene_synonym="DFF-45"
/gene_synonym="DFF1"
/gene_synonym="ICAD"
/codon_start=1
/product="DNA fragmentation factor, 45kDa, alpha
polypeptide"
/protein_id="AAH07112.1"
/db_xref="GeneID:1676"
/db_xref="HGNC:HGNC:2772"
/db_xref="MIM:601882"
/translation="MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRS
KACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGG
TAWISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQE
LRQSCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGE
EVDAVDTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTKEDPKALAVALN
WDIKKTETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNPKRARQDPT"
BASE COUNT 389 a 393 c 408 g 311 t
ORIGIN
1 ggagtagaag gaccgccgct ccggcctccc gcgacttctc gaaggtgggc aggtcccacc
61 ttgtggagga tggaggtgac cggggacgcc ggggtaccag aatctggcga gatccggact
121 ctaaagccgt gtctgctgcg ccgcaactac agccgcgaac agcacggcgt ggccgcctcc
181 tgcctcgaag acctgaggag caaggcctgt gacattctgg ccattgataa gtccctgaca
241 ccagtcaccc tggtcctggc agaggatggc accatagtgg atgatgacga ttactttctg
301 tgtctacctt ccaatactaa gtttgtggca ttggctagta atgagaaatg ggcatacaac
361 aattcagatg gaggtacagc ttggatttcc caagagtcct ttgatgtaga tgaaacagac
421 agcggggcag ggttgaagtg gaagaatgtg gccaggcagc tgaaagaaga tctgtccagc
481 atcatcctcc tatcagagga ggacctccag atgcttgttg acgctccctg ctcagacctg
541 gctcaggaac tacgtcagag ttgtgccacc gtccagcggc tgcagcacac actccaacag
601 gtgcttgacc aaagagagga agtgcgtcag tccaagcagc tcctgcagct gtacctccag
661 gctttggaga aagagggcag cctcttgtca aagcaggaag agtccaaagc tgcctttggt
721 gaggaggtgg atgcagtaga cacgggtatc agcagagaga cctcctcgga cgttgcgctg
781 gcgagccaca tccttactgc actgagggag aagcaggctc cagagctgag cttatctagt
841 caggatttgg agttggttac caaggaagac cccaaagcac tggctgttgc cttgaactgg
901 gacataaaga agacggagac tgttcaggag gcctgtgagc gggagctcgc cctgcgcctg
961 cagcagacgc agagcttgca ttctctccgg agcatctcag caagcaaggc ctcaccacct
1021 ggtgacctgc agaatcctaa gcgagccaga caggatccca catagcagca gcgggaagtg
1081 tgccaaggaa gctctgtggc gttgtgttat tggtagacac cctcagcctc atcatttgac
1141 tacctatgta ctactctacc ccctgcctta gagcaccttc cagagaagct attccaggtc
1201 tcaacatacg ccgttccacc aatttttttt ttagccccac cagcttcagg acttctgcca
1261 attttgaatg atatagctgc accaacaata tcccgcctcc tctaattaca tatgatgttc
1321 tctgttcaaa agtaattggc agtgattggc caggcgcagt ggctcacgcc tgtaatccca
1381 gcactgggag gccgaggggg gcggatcgtg aagtcaggag atcgagacca tcctggctaa
1441 catggtgaaa ccctgtctct actaaaaatg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 a
//